Camelus dromedarius (Arabian camel): 105097199
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Entry
105097199 CDS
T04642
Symbol
PRPF40B
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
cdk
Camelus dromedarius (Arabian camel)
Pathway
cdk03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cdk00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105097199 (PRPF40B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cdk03041
]
105097199 (PRPF40B)
Spliceosome [BR:
cdk03041
]
Complex A
U1 snRNP components
U1 related factors
105097199 (PRPF40B)
Complex B
105097199 (PRPF40B)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
DUF4936
WW_2
RhoGAP-FF1
Motif
Other DBs
NCBI-GeneID:
105097199
NCBI-ProteinID:
XP_031318476
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All DBs
Position
12:complement(12458543..12478855)
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AA seq
896 aa
AA seq
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MKRWQDQREGMKVGSRFWSPAPSSACPLPTGAPHDATTLHAPSGNPPTFSSNGATPHESE
TTSHPSHATWHHAPNASTNGGTTAAHTDTGNGTSHDARNADARSACHRSAAVAGTGPLRA
LWSEHVAPDGRIYYYNADDKQSVWEKPSVLKSKAELLLSQCPWKEYKSDTGKPYYYNNQS
KESRWTRPKDLDDLEALVKQEAAGKQQQPPQTLQPQPSQPQPDPPPVPPGPTSVPTGLLE
PEPGGSEDCDVSEAAQPLEQGFLHQLEEGPSSSAGRRQAPQQEEEESKPEPERSGLSWSN
REKAKQAFKELLRDKAVPSNASWEQAMKMVVTDPRYSALPKLSEKKQAFNAYKAQREKEE
KEEARLRAKEAKQTLQHFLEQHERMTSTTRYRRAEQTFGELEVWAVVPERDRKEVYDDVL
FFLAKKEKEQAKQLRRRNIQALKSILDGMSSVNFQTTWSQAQQYLMDNPSFAQDHQLQNM
DKEDALICFEEHIRALEREEEEERERARLRERRQQRKNREAFQTFLDELHETGQLHSMST
WMELYPAVSTDVRFANMLGQPGSTPLDLFKFYVEELKARFHDEKKIIKDILKDRGFCVEV
NTAFEDFAHVISFDKRAAALDAGNIKLTFNSLLEKAEAREREREKEEARRLRRREAAFRS
MLRQAVPALELGTAWEEVRERFVCDSAFEQITLESERIRLFREFLQVLETECQHLHTKGR
KHSRKGKKHHHKRSHSPSGSESEEEELPPPSLRPPKRRRRNPSESGSEPSSSLDSVESGG
AALGGRGSPSSRLLLGSDHGLRKAKKPKKKTKKRRHKSNSPESETDPEEKAGKESDEKEP
EQDKDRDLRRAELPNRSPGFGIKKEKTGWDTSESELSEGELERRRRTLLQQLDDHQ
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgaagagatggcaggatcagagagaaggaatgaaagtcggttcccgattctggtccccg
gcccccagcagcgcctgcccccttcccaccggggccccccatgatgccaccacccttcat
gccccctccgggaatccccccaccttttcctccaatggggctaccccccatgagtcagag
accaccagccatccctcccatgccacctggcatcatgcccccaatgcttccaccaatggg
ggcaccaccgccgctcacacagataccgggaatggtacctcccatgatgccaggaatgct
gatgcccgcagtgcctgtcaccgcagcgctgctgtggctgggacaggccctctgagggcc
ctatggagtgagcatgtggcccctgatgggcgcatctactactacaatgctgacgacaag
cagtccgtgtgggagaagcccagcgtgctcaagtccaaggcagagctgctgctgtcccag
tgtccctggaaagagtacaagtcagacacaggcaaaccttactactataacaaccagagt
aaggagtcccgctggacccggcccaaggacctggatgacctggaggctctagtcaaacaa
gaggctgcagggaaacagcagcagccgccacagacactacagccacagccttctcagcca
cagcctgaccccccacctgtgccacctggccccacctcggtgcccacgggcctcctagaa
cctgagccaggtgggagtgaagactgcgatgtgtcagaggctgcccagcccctggagcag
gggttcctgcatcagctggaggagggccccagcagttctgctggacggcgtcaggcacca
cagcaggaggaagaagaatcaaagccagaaccagagaggtctggcctcagttggagcaac
cgggagaaggcaaaacaggccttcaaggagctactgagggacaaggctgtcccctccaac
gcttcgtgggaacaggccatgaagatggtggtcaccgacccccgttacagtgccttgccc
aaactgagtgagaaaaagcaggcattcaatgcctacaaagcgcaacgggagaaagaggag
aaggaagaggcccggctaagggccaaggaggccaagcagaccttgcagcatttcctggag
cagcatgagcgcatgacctccaccacccgctatcggcgggcggaacagacctttggcgag
ctggaggtgtgggctgtggtccccgagagggatcggaaagaggtctatgatgatgttctc
ttcttcctggccaagaaggagaaggaacaggccaagcagctccggcgccgcaacatccag
gccctgaagagcatcctggatgggatgagtagtgtcaacttccaaaccacatggtcccag
gcccagcagtacctcatggataatcccagctttgctcaggaccatcaacttcagaacatg
gacaaggaagatgcgctgatctgctttgaggagcacatccgagctttggagagggaggag
gaggaggagcgggagcgggcccggcttcgggagcgccgccagcaacgcaagaaccgggag
gccttccagaccttcctggatgagctgcacgagacagggcagctgcactctatgtccacc
tggatggagctgtacccagctgtcagcactgatgtccgctttgccaacatgctgggccag
ccgggctccacccctctggacttgttcaagttctatgtggaggagttgaaggcacgattc
catgatgagaagaagatcattaaggacatccttaaggaccggggcttctgcgtggaggtg
aacacagcctttgaggacttcgcccacgtcataagctttgacaagagggctgctgcgctg
gatgcaggcaacatcaagctgactttcaatagtctgctggagaaagcagaggcacgggag
agagagcgggagaaggaggaggcacgaaggctgcggcgcagggaagctgccttccgaagc
atgctgaggcaggctgtgcctgctctggagctgggcacggcctgggaagaggtccgtgag
cgctttgtgtgcgactcagcctttgagcagatcaccctggagtcggagcggatccggctc
ttccgagagttcctgcaggtactggagactgaatgccagcacctccacaccaaaggccga
aaacacagcagaaagggcaagaagcaccatcacaagcgttcccactcgccttcaggctct
gagtcggaagaggaggagctgcccccaccgtctctccggcctcccaagcggaggcggcgg
aacccctcggagtcaggctctgagccctcttcctcacttgattctgttgaaagtgggggt
gctgcccttggaggacgaggttccccatcctcccgccttctccttggatcagatcatggc
cttcggaaagccaagaaaccaaaaaagaaaacgaagaagagaagacacaagtcgaacagt
cctgagagtgagacagaccctgaggagaaagctggcaaggagagtgatgagaaagaacca
gaacaggacaaggacagggacctccgtcgggcagagctccctaaccgttccccaggcttt
ggaattaagaaggagaagacgggctgggacacgtcggaaagcgagctgagcgagggtgag
ctggaaagacggcggcggacgctcctgcagcagctggatgaccaccagtga
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