Camelus dromedarius (Arabian camel): 105098477
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Entry
105098477 CDS
T04642
Symbol
SYNPO
Name
(RefSeq) LOW QUALITY PROTEIN: synaptopodin
KO
K21112
synaptopodin
Organism
cdk
Camelus dromedarius (Arabian camel)
Pathway
cdk04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cdk00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
105098477 (SYNPO)
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Gene cluster
GFIT
Motif
Pfam:
Calsarcin
Motif
Other DBs
NCBI-GeneID:
105098477
NCBI-ProteinID:
XP_031305216
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Position
3:109883996..109919817
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AA seq
1164 aa
AA seq
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MLGPHLPPPPLGPSEGRSTPCTFGIPDGSYRCLALEAEESGGEEGLLGEAGFTDLEEDRV
ASRSGDNACRATQGAPQLPRALGLQPPSCFREARGGSQHDDRASQDWDTMKARQVMTASL
SPSLGPRVAQKPALGRSTSLTEKDLKEAKARSQQIAAQLTTPPSSNSRGVQLFNRRRQRV
NEFTLESHGQRGQKPSQESLRVTPASPTGHAPGLSLSATSVPKPGPPRNPNCQSSDIRVP
GHSMEGCSEEASLLRHLEKMASEEEEVPLVVYLKENAALLTANGLHLSQNREAQETPPTP
PTTATTPTTPPPEVHSPATDVNQNLPSSSTTLITPASNSNHNLPATDINQNLPATVTPQS
LPLSSVQQNSSEAQLPPNGTVPDFKPSTLCAGGQPQEPAAEVRSSTLVIDKVSAPPTTTS
AFSREVTPISSSGPPAPDFMSSSLLIDVQLGAPVVSAEQEMSGQAATTMPTKLYSEVHLT
LAKPPSVVNRTARPFGIQASGSTSQMERSPMIERRHLGEKALAPQHPSMADRSPRPQRHV
MSHSPMLERRPMAQRSPALERRPLGAFTPPPTYAETLSTAPLASRVRSPPSYSALYPCSD
PKPSHLKGQAVPASKTGILEESMARRGSRKSMFTFVEKPKVTPNPDLLDLVQTADEKRRQ
RDQGEAGVEEEPFALGAEASNFQQEPTARDRASPAGAEETLPEWASCLKSPRIQAKPKPK
PNQNLSEASGKGAELYARRQSRMEKYVIESSGHTELARCPSPTMSLPSSWKYSTNAPGGF
RVASRSPARTPPASFYHGYLPENGVLRPEPTKQPPYQLRPSLFVLSPIKEPAKALPRAAS
PRAASPAKPSSLDLAPSLPKAAFPPSPALPRPSRNSPGLYTSPGQDGLQPTTVSPTYSSD
ISPVSPSRAWSPRAKQAPRPSFSTRNAGIEAQDRRESLPTSPPWTPGTSRPPSSLDGWVS
PGPWEPGRGSSMSSPPPLPPPPPPMSPSWSERSVSPLRPETEARPPSRQLQALLARNIIN
AARRKSASPRXGGAESLRPFSPLGPRLPPPPPPPPGHQPPPRMRSPQPARPGSAAVPGAT
FAPIPRSPLPTGPSLCTSPQSPLPVPPKPFPYRRSPTDSDVSLDSEDSGAKSPGILGYNI
CPRGWNGSLRLKRGSLPTEASCTT
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgctgggcccccacctcccacccccgcccctgggacccagtgaaggcaggtctaccccc
tgcacctttgggattcctgatgggagctacaggtgtctggccttggaggccgaggagagc
ggcggtgaggagggcctgctgggagaggcagggttcacggacttggaggaagacagggtg
gccagcaggagcggggacaatgcctgcagagccacccaaggggcaccacagcttcccagg
gccctgggcctccagccacccagctgtttcagggaggcacgagggggttcccagcacgac
gacagagccagccaggactgggacacgatgaaggcccggcaggtgatgacagccagcctc
agccccagccttgggcccagggttgcccagaaaccagcattgggccggagcaccagcctc
accgagaaggatctaaaagaggccaaggcgaggagccagcagatcgcagcccagctgacc
acccctcccagctccaactcccgcggagtccagctcttcaacaggcgccggcagagggtg
aatgagttcaccttggagagccacggccagaggggacagaagcccagccaggagtccctc
cgagtgacccctgccagccccacaggccatgccccagggctcagcctgagtgccacctcg
gtccctaagccaggccctccgagaaaccccaactgccagagctctgatataagggtccct
ggtcacagcatggaaggctgctcagaggaggccagcttgctgcggcacctggagaagatg
gccagtgaggaggaagaggtaccactggtggtttatttaaaggagaacgctgccctgctg
acagccaatgggctccacctgtcccagaaccgagaagcccaggagaccccaccaacccca
cccaccaccgccaccacccccaccaccccgcccccggaggtccacagcccagccacagat
gtcaaccaaaacctcccctcatccagcaccacgctcatcactccagcttctaacagcaac
cacaacctgccagccacagatatcaatcagaacttaccggcaactgtcaccccgcagagc
ctgccactttctagtgtccaacagaattcttcagaagcacaactcccgcctaatggcaca
gtgccagatttcaaacccagcaccctgtgtgctggtgggcagccccaggagccagctgca
gaggtgagatccagcaccctcgtaattgataaggtatcagctccacctaccaccaccagc
gccttctccagagaagttactcccatctccagctccgggcccccagccccagatttcatg
tccagctccctgctcatcgatgtccagctcggcgccccagtggtgtcagcagaacaagag
atgtccgggcaggcagccacaaccatgcccaccaagctgtacagcgaggtccacctcacg
ctggccaagcccccatccgtggtcaacaggacagccaggccctttgggatccaggcttca
gggagcaccagccagatggagcggagccccatgatagagagacgacatcttggggagaag
gccctggctccccagcaccccagcatggcagaccggagtcctcggccacagagacatgta
atgtcccacagccccatgctggagaggaggcccatggcacagcgaagccccgccttggag
agacgccccttgggagccttcaccccgccccctacctatgctgagaccttgtccacggcc
cccctggcttcccgggttaggtctcccccctcttactctgccctgtacccctgctctgac
cccaagccttctcatctaaagggccaggcagttcctgccagcaagacaggcattttggag
gagtcaatggcccgcaggggcagccggaaatccatgttcacctttgtggagaagcccaag
gtgaccccgaatccagacctgctggatctggtccagacagctgatgagaagaggaggcag
agagaccagggggaggcaggcgtggaggaggagcccttcgcgctgggggccgaagcctcc
aacttccagcaggaacccacagcccgggacagggccagccccgcgggcgctgaggagact
ctccccgagtgggcctcgtgcctcaagtcgccgcgcatccaggccaagccgaagcccaaa
cccaaccagaacctctccgaggcctccgggaagggggctgagctctacgcccgccgccag
tcccggatggagaagtacgtcatcgagtcttcgggccacacggaactggctcgctgccct
tcacccactatgtccctgccttcatcctggaagtactccacgaatgcgcctggtggcttc
cgagtggcatcccgaagcccagctcggaccccgcctgcctccttctaccatggctacctg
cctgagaacggggtcctgcgcccagagcccaccaagcagccaccctaccagctgcggccc
tcgctgttcgtcctctcacccatcaaggaacctgccaaggccttgcctagagctgcctcg
cccagagccgcctcacctgccaagccgagctccctggacctggcacccagcctgcccaag
gcggccttcccaccgtctcctgccctgcctcggccctcccgcaactcaccgggcctctac
acctcccctggccaggacggcctccagcccactacagtgagccctacctacagcagtgat
atctcccccgtgtctccctccagggcctggtctccccgagccaagcaggcccccaggccc
tccttctccacccgtaatgccgggatcgaggctcaggaccgccgggagagcctacccacc
tccccgccctggacgccaggcacatcccggccccccagcagcctggacggctgggtgagc
ccggggccgtgggagccgggccgtgggagcagcatgagcagccccccgccgctgccgcca
ccgccacctcccatgtccccctcgtggagcgagcgctcagtatccccgctgcgacctgag
acagaggcgcggccccccagccgccagctgcaggcgctcctggcgcgaaacatcatcaat
gcggcccggcgcaagagcgcctccccgcggnccggcggcgccgagagcctgcgcccgttc
tccccgctaggcccgcgcctgccgccaccgccgccaccgccgccaggccaccagccgccg
ccgcgcatgcgctcgccgcagcccgcccgccccggttcggccgcggtgcccggggccaca
ttcgctcccatcccgcggagcccactgcccaccgggccctcgctctgcaccagtccccag
agcccgctgcccgtgccgcccaagccattcccctaccgccgctcgcccacggactccgac
gtgtcccttgattccgaggactccggggctaagtcgcccggcatcctcggctacaacatc
tgtccccgcgggtggaatggcagcctgaggctcaagcgtggcagcctccccaccgaggcc
tcctgcaccacctaa
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