Camelus dromedarius (Arabian camel): 105099832
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Entry
105099832 CDS
T04642
Symbol
SLX4
Name
(RefSeq) structure-specific endonuclease subunit SLX4 isoform X1
KO
K10484
structure-specific endonuclease subunit SLX4 (BTB/POZ domain-containing protein 12)
Organism
cdk
Camelus dromedarius (Arabian camel)
Pathway
cdk03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cdk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
105099832 (SLX4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cdk04121
]
105099832 (SLX4)
03400 DNA repair and recombination proteins [BR:
cdk03400
]
105099832 (SLX4)
Ubiquitin system [BR:
cdk04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
105099832 (SLX4)
DNA repair and recombination proteins [BR:
cdk03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
105099832 (SLX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slx4
BTB
YlbE
Motif
Other DBs
NCBI-GeneID:
105099832
NCBI-ProteinID:
XP_010991030
LinkDB
All DBs
Position
Unknown
AA seq
1782 aa
AA seq
DB search
MDESDDDFKELCASFFQRVKKNGSKEVSGERKTQKASNSTQIRSKLKRTKPAASKSKTLQ
GPAERKTRSGSQAPRPQKQRAPKWPESEPAPPENGEGGVHASAVLQDSTWSTQTEAAPDS
NSQPLPSCLTVMVPSPSKPRAAELVLQRMQQFKRADPERLKHASEGCSLEAALEENVPKG
PQEEMMAGNGSGLGLPAMESDAEVALVLQREFGQERASARDDSLEEKGLFFCQLCQKNLS
AMNVTRREQHVNRCLDEAEKALRPSAPQIPDCPICGKPFLTPKSRISHLKQCAVKMEVGP
QLLLQAVRLQTAQPEGAGSTPAQSLSNHIGGLKRKGATTKKEPRKRRKVAEPEVSPEDLQ
VAMALSRSEMEQEVVPAALRLGNVFSERMGLGAEKKSRKKKAPASPPQLLVQDRETTGRQ
IEDRVAQLFAEEVELSCTPPLPASRILKEELKKGSWCLRPPGGKQNFLWEGSALTGAWAL
ESFYTVSLVPAMAPQRPPEEPTRPPVLPERPELVQTPPAVHSACPADRSPGNPLPSASQR
EHQALQDLMDLAREGLSASQWPCTQGSAGSGGAPGMDLLPGGLPLTGFVLPAKKCPEMDH
QASLSLSLLVADFSAMVNNPHLSDIQFQTDSGEVLYAHKFVLYARCPLLMQYVNSEAFFA
VEDGDVRAQRVLLSDISAAAARAFLCYLYTADTVLPPQLAPDLSSLAHRFGVSELVHLCE
QVPAAMDSEGRPREEQEGEDCESRAETFQELLRAVWLEEEEEAEALVRSEDHEEDRERVN
EAEMEEIYEFAATQRKLLQGEKAPEVEGEADQLGEDGPVSGGIFTSVEDKEQSGDEEQME
SSGRGRDEAPAKWKDIRLSVPLPAGVQGWDGAERAESPKEGLDSPRSPSPARGLTEKKES
TSLCSEQPFSSFHAGHPVLSQVTGDRKERNGTIWEPGVGSSPPSPRQQATPSPSHSFLSQ
SPPGRSPRQPRACPHHTTDLSPPTHQSQGTASRVASQNAPAKPKRARSLPTSHKEPSQKG
KECGSVLACRGKGVLISPEKSPSMDITQSKPGCLSSRSQNSPSGVNREDEIILLLDSDEE
LELEQTRTKSLLNGPPEERKVLEVSTKSSELFSIIDVDAEQEPSQSPPGREAMLQREVEG
PSRNRGFVGGRGTSRLFCDPESSRGEDSTTDTSWLVPATPLASRSRNCSSQTQIMGLGSR
PSADQVAPPKPRAPLENGDVPEATNKFSVIVPQMSSSRLGPVTPGSSDSGRQVCRSLSSL
RPRHHQHFSPPAPCPVSGVLTDLTGQLQKRPPPGPSQAAQATASEVVEVEDSEDEQDGAP
QQASSSPLLDGDPPIPVDDWCWHVEPLSPIPIDHLNLERTGPLSTSSPGSRAGGAPDSGD
CHSPALLGTTPIRGSCTGLRKAQEKSPGAGSLGSSRLSFLNSALWEDWDGEERKSPEALP
LAQMPGADGAQKAGEFQTPKGANRKKNLPPKVPITPMPRYSIMETPVLKKELDRFGVRPL
PKRQMVLKLKEIFQYTHQTLESDSEDESWSSHMPLEAPCSQSHTTKTCKASRAAGHTQVE
ATSRPIPQRSKGPAKTKGPQHLKQQPGGSNLALSVSPAKEVPPGPDGDTQLLASQESTAT
SADSSDSSCSSQSSSCEFGAALESAGEDEAGEEGVSASQAAVQAVATEEAVRRYIRSQPA
LYRKVLLYQPFELAELQAELKQQGICMAMGKLLDFLDAHCITFTTAAARREKLERKRRRR
VGKKKQGRTSRPVPPSPSPAISSLRVCSPLLEPGPRGVSTPL
NT seq
5349 nt
NT seq
+upstream
nt +downstream
nt
atggatgagtcagacgatgactttaaggaactctgtgccagctttttccaaagggttaaa
aagaatggctccaaggaagtgtctggggaaaggaagacacaaaaggcctccaacagcacc
cagataagaagcaaactgaaaaggaccaaaccagctgcttccaagagcaaaaccctgcaa
ggccctgctgagaggaaaactcgatctggcagccaggccccacggcctcaaaagcagagg
gcacccaagtggccggagagtgaaccagctccccctgagaatggggagggaggtgtgcat
gcttctgctgtgctccaagacagcacgtggagcacccagacagaggctgctcctgacagc
aactcccagccgcttccttcctgtctgactgtgatggtgccaagtccctccaaaccccgg
gcagcagagctggtcctacagcggatgcagcagttcaagagagcagaccccgagcgtttg
aaacatgcttctgaagggtgctccctcgaggctgcgcttgaagaaaacgtcccaaagggc
cctcaagaggagatgatggcggggaacgggtctgggctggggctcccggccatggagagc
gacgctgaggtggccttggtcctccagcgggagtttgggcaggaacgggcatctgcacgt
gacgacagcctggaggagaagggcttgttcttctgccagctctgtcaaaagaacctctcg
gctatgaatgtgacgcgaagggagcagcatgtgaaccggtgcttggatgaggctgaaaag
gcactgagaccttctgcacctcaaatccctgactgcccaatttgtggcaagccatttctc
accccaaagagcagaatcagtcacttgaaacagtgtgcggtgaagatggaggttggccca
cagctcctgctccaggccgtgcggctgcagacagctcagcctgagggggctggcagcaca
ccggcgcagagcctcagcaatcatattggaggtctaaagcggaagggagccaccaccaag
aaggagccacggaagaggcggaaggtcgccgagcctgaggtgtcacctgaggacctgcag
gtggccatggctctgtcccggtccgagatggagcaggaggttgtgccggcggcgctcaga
ctgggaaatgttttttctgagaggatgggactgggagcagagaagaagagtcgcaagaag
aaagcacctgcttccccaccccagctgttagttcaggaccgggagaccacagggagacag
atagaggatcgcgtggcccagctctttgcagaggaggtggagctgtcctgcacgccgccc
cttcctgccagcagaattttaaaggaggagctaaagaagggcagctggtgtctgcgaccg
cctggagggaagcagaactttctgtgggagggcagcgccctgaccggggcctgggctctg
gaatccttctacacggtcagcctggtccccgccatggcacctcagcggccccccgaggag
cccacgcgaccaccagtgctgcctgagaggccagagctggtgcaaacgccacctgctgtc
cacagtgcctgccctgcggaccgcagccctgggaacccgttgccctctgccagccagagg
gagcatcaggccctgcaggacctcatggacctggcaagagaggggctgagtgccagccaa
tggccctgcacccagggctcagccggctctggaggggccccagggatggacttgctgcct
ggtggccttccactgactgggtttgtcctgccagccaagaagtgcccggagatggatcac
caggcttcgctctctcttagtttgctggtggctgacttcagtgccatggtcaataacccc
cacctgagtgacatccagtttcagacggacagcggggaggtgctttatgcccacaagttc
gtgctttatgcccgatgcccacttctcatgcagtatgtgaacagtgaggcctttttcgct
gtggaagatggtgatgtgagggcccagcgtgtcctgctgagtgacatcagcgctgcggct
gcccgcgcgttcctgtgttatctctacactgccgacactgtcctgcctccgcagctggcc
cctgacctgagctctctggcccacaggtttggtgtgagtgagctcgttcacctgtgcgaa
caggtgcctgcggcgatggattcggagggcaggccgcgggaggagcaggaaggtgaggac
tgtgaaagcagagcggagaccttccaggagctcctgcgggcagtgtggctggaggaggag
gaggaagcagaggctctggtgagatccgaggaccatgaagaagacagagaaagagtgaat
gaggcagagatggaagaaatttatgagtttgcagctactcagcgaaagcttctccagggg
gagaaagctccagaggtcgagggagaagctgaccagctgggggaggatggcccagtttct
gggggaatcttcacaagcgttgaggataaagaacagtcaggagacgaagaacagatggaa
tcatctgggcgagggagagatgaggccccagccaaatggaaagacatcagactgtccgtt
cccctgcccgctggggtccagggctgggacggggcagagcgggcagagtccccgaaggaa
gggctggacagtccccgctctcccagccctgcacggggcctgacagagaagaaggagagc
acctctttgtgctctgaacagcccttctcgtcatttcacgccggacaccctgtactgtcc
caggtgacaggtgatcgcaaggaaagaaacggcaccatctgggaaccaggagtggggagt
tcccctccctctcctcgccagcaggcaaccccctcaccctcacactccttcctatcacag
tcccctccgggcaggagtccccgccagccacgcgcttgccctcatcacaccactgacctg
tccccgccaacccaccagtcacagggcaccgcttccagggtggcctcccagaacgcacca
gcaaagccaaagagggcaaggagccttcccacatcacataaggagcccagccagaaaggc
aaggagtgtggttctgtgttggcatgcagaggtaaaggggtcctgatctccccagaaaaa
tctccatccatggacataacccagtcaaaacctggctgtttgagttccaggtctcagaac
tctccatctggcgtgaacagagaagatgagattatccttttattggattcagatgaagag
ctggagctagagcaaaccagaacaaagtcacttttgaatggtcccccagaagaaaggaaa
gttctagaagtgagcaccaagtcctctgagctgttttccatcatcgacgttgatgcggag
caggaaccttcccaaagcccaccaggaagggaggccatgctgcagcgggaggtggagggg
ccatcaaggaaccggggctttgttgggggcagagggacctcccggctgttctgtgaccct
gagagcagccgcggcgaggacagcaccacagatacgtcatggctggtgcctgccaccccg
ctggccagcagaagccgcaactgctcgtcgcagacccagatcatgggcctcgggtccagg
ccctcagcagatcaagtggccccacctaagcccagggccccgttagagaacggggatgtg
ccagaagccacaaataagttttcagtcattgtgccccagatgtcatcgtcacgcttgggc
cccgtcactcctggcagctctgacagtgggaggcaggtgtgtagaagcctgtccagtctc
cgtcccagacaccaccagcacttctctcctccagctccctgtcccgtctcaggagtcctc
accgatctcaccgggcagctccagaagcgcccgccacctggcccgagccaggcggctcag
gccacagccagtgaagtggtggaggtggaggacagtgaagacgagcaggacggggccccc
cagcaggcaagcagcagccccctgctggacggtgaccccccgattccagtcgacgactgg
tgttggcacgtggagcccctctcaccaattccgattgaccacttgaaccttgagcggacc
ggccccctgagcaccagcagccccggcagtagggcagggggcgccccggacagtggtgac
tgccactccccagcactgctgggcaccacccccatccgaggaagttgtactggcctaaga
aaggctcaagagaaatcccctggggccggctcccttgggagcagcaggctgagctttctg
aattcagctctgtgggaagactgggatggagaggaacggaagtccccagaggctcttcct
ctggcccagatgccgggtgctgatggagctcagaaagcaggagagtttcagacgccgaaa
ggtgctaatcggaagaagaacttgccccccaaagtgcccataacccctatgccaaggtat
tccatcatggagaccccagtgctgaagaaggaactggataggtttggggtccgccctctg
cccaaacgccagatggtcctgaaactgaaggagatattccagtacactcaccagacgctg
gaatcagactctgaggatgagagctggtcctcacacatgcccttggaggctccttgtagc
cagtctcacaccaccaagacctgcaaggcttcaagggcagctggccacacccaggtggag
gccacttctcgccctattccccaaaggtccaaggggcctgccaagaccaagggcccccag
catctaaagcagcagcctggtggaagcaacctggccctgagcgtgtcaccagccaaggag
gtgcctccaggccctgatggtgacacccagctcctggcctcccaggaatccacggccacc
tctgcggacagcagtgacagctcctgtagctcacaaagttcttcctgtgagtttggagcg
gccttggagtctgcaggagaagacgaggcaggtgaggagggggttagcgcttcgcaggcg
gccgtccaggcagtggccacagaggaggccgtgaggcgttacatccgctcccagccggcc
ctctaccgcaaggtcctcctgtaccagcccttcgagctggcagagctgcaggccgagctg
aagcagcaaggcatctgcatggccatggggaagctgctggacttcctggatgcccattgc
atcaccttcaccacagctgccgcccgcagggagaaactggagaggaagagacggcggcgt
gtgggcaagaagaagcagggcaggaccagcaggcctgtgcccccctccccatccccggcc
atcagcagcctgagggtctgcagcccccttcttgagcctggcccccgcggggtttccact
cccctatga
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integrated database retrieval system
