Camelus dromedarius (Arabian camel): 105099992
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Entry
105099992 CDS
T04642
Symbol
COP1
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase COP1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
cdk
Camelus dromedarius (Arabian camel)
Pathway
cdk04115
p53 signaling pathway
cdk04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cdk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105099992 (COP1)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
105099992 (COP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cdk04121
]
105099992 (COP1)
Enzymes [BR:
cdk01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105099992 (COP1)
Ubiquitin system [BR:
cdk04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105099992 (COP1)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
105099992 (COP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_EIPR1
zf-C3HC4_2
WDR55
Beta-prop_RIG_2nd
EIF3I
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
zf-C3HC4
zf-RING_2
Beta-prop_CAF1B_HIR1
zf-RING_UBOX
Beta-prop_EML
zf-C3HC4_3
Beta-prop_DCAF4
zf-RING_5
Beta-prop_WDR90_POC16_2nd
zf-C3HC4_4
RING_XB3-XBAT31
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
WD40_like
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_IFT122_1st
zf-rbx1
zf-RING_10
zf_C2H2_10
zf-RING_11
Sina_RING
zf-Nse
Motif
Other DBs
NCBI-GeneID:
105099992
NCBI-ProteinID:
XP_010991220
LinkDB
All DBs
Position
21:7780673..7945813
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AA seq
765 aa
AA seq
DB search
MHEAEGREVAAGRGRGHLSSERPAGGEGVTMSGSRQXGSGSAGTSPWLLAAHRLTSASRP
YSXPFAPPVAASAAALGSGGAAQAAGSGGLGAPVRPVLVAAAGSGSGGGGAAAGQVVRGL
SRLSCAARPSAGVGGSSSSLGSGSRKRPLLAPLCNGLINSYEDKSNDFVCPICFDMIEEA
YMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELILKQKQRFEEKRFK
LDHSVSSTNGHRWQVFQDLLGTDQDNLDLANVNLMLELLVQKKKQLEAESHAAQLQILME
FLKVARRNKREQLEQIQKELSVLEEDIKRVEEMSGLYSPVSEDSTVPQFEAPSPSHSSII
DSTEYSQPPGFSGSSQTKKQPWYNSTLASRRKRLTAHFEDLEQCYFSTRMSRISDDSRTA
SQLDEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIK
VYEYDTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRS
KVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEAKANVCCVKFSPS
SRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWN
VGKPYCLRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSV
LDKDRKEDDTNEFVSAVCWRALPDGESNVLIAANSQGTIKVLELV
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgcatgaggcagaggggagggaggtggcggcgggtcgcggtcgcggtcacctctcctcc
gagcgcccggccggaggggagggagtcacgatgtctgggagccgccagnccgggtcgggc
tccgccgggaccagcccctggctcctcgcggctcatcggttgacttccgcctctcgtcct
tactctntcccgttcgcccctcccgtggcggcttcagcggcagcgctggggtccggcggg
gcggcccaggccgcgggctcgggcggcctcggggccccggtgcggcctgtgctggtggcg
gccgccgggtctggcagcggcggcgggggagcggcggcggggcaggttgtccgcggcctg
tcccggctcagctgcgcggccaggcccagcgccggcgtaggagggagcagctccagccta
ggcagcggcagcaggaagcgacctctgctcgccccgctgtgcaacgggctcatcaactcc
tacgaggacaaaagcaacgacttcgtctgccctatctgctttgatatgattgaggaagca
tacatgacgaagtgtggccatagcttttgctacaagtgtattcatcagagtttggaggat
aataatagatgtcccaagtgtaactatgttgtggataatattgaccatctgtatcctaat
ttcttggtgaatgaactcattctcaaacagaagcaaaggtttgaggaaaagagattcaaa
ttggaccactcagtgagtagcaccaatggccacaggtggcaagtatttcaggatttgttg
ggaaccgaccaagataaccttgatttggcgaacgtcaaccttatgttggagttactagtg
cagaagaagaaacaactggaagcagaatcacatgcagcccaactacagatccttatggaa
ttcctcaaggttgcaagaagaaataagagagagcaactggagcagatccagaaggaatta
agtgttttggaagaggatatcaaaagagtagaagaaatgagtggcctgtactctcctgtc
agtgaggacagcacggtgcctcagtttgaagctccttctccatcacacagtagtattatt
gattccacagaatacagccaacctccaggtttcagtggcagttctcagacaaagaaacag
ccctggtataacagcacattagcatcaagacgaaaacgactcactgctcattttgaggac
ttagagcaatgttacttttctacaaggatgtctcgtatctcagatgacagtcgaactgca
agccagttggatgaatttcaggaatgcttatccaagttcactcgctataattcagtacga
cctttggctacattgtcatatgctagtgatctctataatggctccagcatagtttccagt
attgaatttgaccgggattgtgactattttgcaattgctggggttacaaagaagattaaa
gtctatgaatatgacacagtcattcaggatgcggtggatattcattaccctgaaaatgaa
atgacctgcaattccaaaatcagctgtatcagttggagtagttaccataagaacctgtta
gccagcagtgattatgaaggcacggtcattctgtgggatggattcacaggacagaggtca
aaggtctatcaggagcatgagaagaggtgttggagtgttgactttaatttaatggatcct
aaactcttggcttcgggttctgatgatgcaaaagtgaagctatggtctaccaacctagac
aactcagtggcgagcattgaggcgaaggctaacgtgtgctgtgttaaattcagcccctct
tccagataccatttggctttcggctgtgcagatcactgtgttcactactatgatcttcgt
aacactaaacagccaatcatggtattcaaaggacaccgaaaagcagtctcttacgcaaag
tttgtgagtggtgaggaaattgtctctgcctcaacagacagccagctaaagctgtggaac
gtagggaagccatactgtctacgttccttcaagggtcacatcaatgaaaaaaacttcgta
ggcctcgcttccaatggggattatatagcttgtggaagcgagaacaactctctttacctg
tactataaaggactttctaagactttgctaacttttaagtttgatacggtcaaaagtgtt
ctggacaaagaccgaaaagaagatgatacaaatgaatttgttagtgctgtgtgctggagg
gcactgccagatggggagtccaatgtgctgattgctgctaacagtcagggtacaattaag
gtgctggagttggtatga
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