KEGG   Camelus dromedarius (Arabian camel): 105100134
Entry
105100134         CDS       T04642                                 
Symbol
COPA
Name
(RefSeq) coatomer subunit alpha isoform X1
  KO
K05236  coatomer subunit alpha
Organism
cdk  Camelus dromedarius (Arabian camel)
Brite
KEGG Orthology (KO) [BR:cdk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cdk04131]
    105100134 (COPA)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cdk04147]
    105100134 (COPA)
Membrane trafficking [BR:cdk04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    105100134 (COPA)
Exosome [BR:cdk04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   105100134 (COPA)
  Exosomal proteins of bladder cancer cells
   105100134 (COPA)
SSDB
Motif
Pfam: COPI_C B-prop_COPA_B_2nd Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd WD40_CDC20-Fz Beta-prop_WDR3_2nd WDR55 Beta-prop_EML_2 TPR_COPA_B Beta-prop_WDR36-Utp21_1st EIF3I WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_WDR75_1st WD40_RFWD3 WD40_MABP1-WDR62_1st ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_WDR41 Beta-prop_SCAP Beta-prop_Aladin Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_RIG_2nd NBCH_WD40
Other DBs
NCBI-GeneID: 105100134
NCBI-ProteinID: XP_031291821
LinkDB
Position
21:19427303..19465803
AA seq 1237 aa
MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSG
SKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDAESITLFDVQQK
RTLASVKISKVKYVIWSADMSHVALLAKHEHSCPLPLTAIVICNRKLEALCNIHENIRVK
SGAWDESGVFIYTTSNHIKYAVTTGDYGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLT
IDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSL
ALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITG
NLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEA
ESLKETFDPEKETVSIYIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGSMASKGK
GGALAADIDIDTVGTEGWGEDAELQLDEDGFVEATEGLGDDALGKGQEEGGGWDVEEDLE
LPPELDLPPGAAGGAEDGFFVPPTKGTSPTQIWCNNSQLPVDHILAGSFETAMRLLHDQV
GVTQFGPYKQLFLQTYARGRTTYQALPCLPSMYGYPNRNWKDAGLKNGVPAVGLKLNDLI
QRLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSME
IERKKLPKDTLEQQKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARR
LLELGPKPEVAQQTRKILSACEKNPTDAYQLNYDMHNPFDICAASYRPIYRGKPVEKCPL
SGACYSPEFRGQICKVTTVTEIGKDVIGLRISPLQFR
NT seq 3714 nt   +upstreamnt  +downstreamnt
atgctaaccaagttcgagaccaagagcgcgcgggtcaaagggctcagttttcacccaaaa
agaccctggatcctgaccagtttacacaatggggtcatccagttatgggactatcggatg
tgtaccctgattgacaagtttgatgaacatgatggtccagttcgaggcattgacttccat
aagcagcagccactgtttgtctctggaggagatgactataagattaaggtttggaattac
aagcttcggcgctgcctcttcacattgcttgggcacttagactatattcgcaccacattt
tttcatcatgaatatccttggattctgagtgcctcagatgatcagaccatccgagtgtgg
aactggcagtctagaacctgtgtctgtgtgttaacggggcacaaccattatgtaatgtgt
gctcagttccacccctcagaagacctggtcgtatcagccagtctggaccagactgtgcgc
gtttgggatatttctggtctaaggaaaaaaaacttgtcccctggtgcggtggaatcggat
gtaagaggaataactggggttgatctgtttggaactacggatgcagtggtgaagcatgta
ctggagggtcatgatcgcggagttaactgggctgccttccaccccactatgccccttatt
gtatctggggcagatgaccgtcaagtgaagatctggcgcatgaatgaatcaaaggcatgg
gaggttgatacctgccggggccattacaacaatgtgtcttgtgctgtcttccaccctcgc
caggagttgatccttagcaattctgaggacaagagtatccgagtctgggatatgtcgaag
cggactggggttcagaccttccgcagggaccatgatcgtttctgggtcctagctgcccac
cctaaccttaacctctttgcggcaggtcatgatggtggcatgattgtatttaaactggaa
cgagaacggccagcctatgctgttcacggcaacatgctacattacgtcaaggaccgattc
ttacgtcagttggatttcaacagctccaaagatgtagctgtgatgcagctgcggagtggt
tccaagtttccagtgttcaacatgtcctacaatccagcagaaaatgcagtcctgctgtgt
acaagagccagcaatttagagaatagtacctatgacttgtacactatccccaaggatgcc
gactcccagaatcctgatgctcctgaagggaaacgatcctcaggcctgacagctgtttgg
gttgctcgaaatcggtttgctgtcctagatcggatgcattcgcttctgatcaagaatctg
aagaatgagatcaccaaaaaagtacaggtgcccaactgtgatgagatcttttacgctggc
acaggcaacctcctgcttcgagacgcagaatccatcacactctttgatgtacagcagaag
cggactctggcttctgtgaagatttccaaggtgaaatatgttatctggtcagcagacatg
tcccatgtagcactactggccaaacatgagcactcatgtcctttgcctcttacagccatt
gtgatctgtaaccgcaaactggaggcactatgtaacattcatgagaacattcgtgtcaag
agtggggcctgggatgagagtggggtatttatctataccacaagcaaccacatcaaatat
gctgtcaccactggagactacgggatcatccgaactctagatttacccatctatgtcaca
cgggtgaaaggcaacaatgtatattgcctagacagggagtgccgtcctcgggtgctcacc
attgatcccacggaattcaagttcaagttggccctgatcaacagaaaatacgacgaggta
ctacacatggtgaggaatgccaaactagtaggccagtctatcattgcttatctccagaag
aagggatatcctgaagtggcactgcattttgtcaaggatgagaagactcgctttagtctg
gcactggagtgtggaaacattgagattgctctggaagcagccaaagcactggatgacaaa
aactgctgggaaaagttgggagaagtggctctgctacaggggaaccaccagattgtggaa
atgtgttatcagcgcaccaaaaactttgacaaactttccttcttatacctaatcactggc
aacctagagaaacttcgcaagatgatgaagattgctgagatccgaaaggacatgagtggc
cattatcagaatgctctatacttgggagacgtgtcagagcgggtgcggatcctgaagaac
tgtgggcagaagtcactggcatatctcacagctgctacccatggcttagatgaggaagct
gagagcctgaaggagacatttgacccagagaaggagacagtgagtatttacatcccagac
attgatcctaatgccaagctgcttcagccgcctgcacctatcatgccgttggataccaac
tggcccttattgactgtgtccaaagggttctttgaaggctctatggccagcaaggggaag
ggaggagcactggctgctgacattgacattgacactgttggtactgagggctggggagag
gatgcggagctgcagctggatgaagatggatttgtggaagctacagaaggtttgggggat
gatgctcttggcaagggacaagaagaaggaggtggctgggatgtggaagaagatctggag
ctccctcctgagctggatctaccccctggggcagctggtggggctgaggatgggttcttt
gtgccccccaccaagggaaccagcccaactcagatctggtgcaataactctcagcttcca
gtcgatcacatcttggcaggctcttttgaaacagccatgcggctccttcatgaccaagta
ggggtaacccagtttggcccctacaagcaactgttcctgcagacctatgcccgaggccgt
accacctatcaggctctgccctgcctgccctccatgtatggctaccctaatcgcaattgg
aaagatgcagggctgaagaatggtgtgccagctgtgggcctgaagcttaatgacctcatc
cagcgactgcaactgtgctaccagctcaccacagttggcaagtttgaggaggctgtggaa
aaattccgttccattttgctcagtgtgccacttcttgttgtggacaataaacaggagatt
gcggaggcccagcagctcatcaccatttgccgtgagtacattgtgggtttgtccatggag
atagaaaggaagaagctgcccaaagacactctagaacagcagaagcgcatctgtgagatg
gcagcctacttcacccactcaaacctgcagccagtgcacatgattctggtgctgcgtaca
gccctcaacctcttcttcaagctcaagaactttaagaccgctgccacctttgctcggcga
ctgttggaacttgggcccaaaccagaggtggctcaacagacccgtaaaatcctgtctgcc
tgtgagaagaaccccacagatgcctaccaactcaattacgacatgcacaacccttttgac
atctgcgctgcatcttatcggcccatttaccgtggaaagccagtggagaaatgtccactc
agcggagcctgctattcccctgagttcaggggtcaaatctgcaaggtcaccacagtgaca
gagattggcaaagatgtgattggtttaaggatcagtcctctgcagtttcgctaa

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