Camelus dromedarius (Arabian camel): 105100384
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Entry
105100384 CDS
T04642
Symbol
PNLDC1
Name
(RefSeq) poly(A)-specific ribonuclease PNLDC1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
cdk
Camelus dromedarius (Arabian camel)
Pathway
cdk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cdk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105100384 (PNLDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdk03019
]
105100384 (PNLDC1)
Enzymes [BR:
cdk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
105100384 (PNLDC1)
Messenger RNA biogenesis [BR:
cdk03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
105100384 (PNLDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
105100384
NCBI-ProteinID:
XP_031312498
LinkDB
All DBs
Position
8:73763788..73781919
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AA seq
770 aa
AA seq
DB search
MAFCPFSDCKGIAAEQGKRPLIAKAESKQPFTLAGKVFKGKHLGANTWARAVASAAGRHR
RRLPGPVARGGVAFLPREPFKAAARRKRVAARGRTGRPRPSCVAMDLGADEFEQSLPLLQ
ELVLGADFLGKAPVLRASSPEPPGRASLRRMWLGGTGRRGEAQPGGRQAAGGSNRAPEQD
RDSLSGLGGGKLSSNYTLAPSVVQVERGGLACPCFVSLFSLLDLIWPLEHQEGDQYLCHL
QHLQHEGGGSVLCPGTLVFFASLAGLDIEFTGLRSNLSRPQQISLFDLPSEWYLKTRQSV
QQFTICQIGLSAFSSIEGESSKYVAHSCNFFLFPTTFGILDSEFSFQASSIQFLNRYGFD
YNKFLKKGIPYMNEEQEKTIKHSILTGNWRVRSSLHKDQIKAVINEVTRWLDLAEEGDWM
TLPDIAGFQAFEVQLVLRKALPDIWTMLREHGVIVKKVSKQHRWYLENTSCDRESCWKEK
TLLSARGFSVFFQMLVKAQKPLVGHNMMMDLLHLHEKFFRPLPESYDEFKLNIHNLFPIL
IDTKNVTKDIWKELNFPRVSSLSELHDILNSDLNPTKDSGPVIIHASKCEKYVETKYPHE
AAYDAFLCGSVFLRVAHLLLWRVHGSVPMPEPSFPLYLDVLAPYVNQVNLIRAGVPKINF
SGPDYPSIRPPILILSVRSWRGVSEQQVYREFQNLCKFDVRRLTRSQFLLLTNKFKDARS
VLKEYRGHPTLRVSLYRYWRHSPNINCLLQVCGVVTTWALVAFLLGRPHS
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atggcattctgcccttttagtgactgcaaaggaatcgccgcggagcagggtaaacggcct
ttgattgctaaggcggagtctaagcaacccttcaccctagcgggcaaagtgtttaagggc
aagcacctgggggcaaacacctgggcgcgggcggtggccagcgcagccgggcggcacaga
cggaggctcccggggccggtggcgcgcgggggcgttgcgtttctcccgcgcgagcccttt
aaggcggcggcgcggcggaagcgcgtggcagcgcgtggccgcactgggcgccctcggccg
agctgcgtggccatggacttgggcgccgacgagttcgagcagagcctcccgctgctgcag
gagctcgtcctgggcgcagacttcctgggtaaggcgcctgtattgcgggcctcgtcgccg
gagccccctggccgggcgagcctgcggaggatgtggctcggtgggacagggcggagaggg
gaggcccagccgggtggtcgccaggccgcaggaggctcaaatagggcccctgagcaggac
agagattccctctcgggcctgggcggtgggaagttaagcagcaattacacccttgccccc
agtgtggtccaggtggaacggggtggcctggcttgtccttgctttgtctccctgttttcc
cttcttgacctcatctggcctcttgagcaccaagaaggtgaccagtacctttgccaccta
cagcatttacagcatgagggaggtggtagtgttctgtgccccgggactcttgtctttttt
gcctcccttgcaggtctggatatagaattcacaggccttcgttctaacctgtccaggccc
cagcagatcagtctttttgacttgccgtcagagtggtatctaaagactcgtcagagtgtt
cagcaattcacaatctgtcagataggattgtcagcgttctccagtattgaaggagagtca
agcaagtatgtagcccattcgtgtaacttctttctcttccctacaacgtttgggattttg
gattcagagttctctttccaggcttccagcattcagtttttgaatcggtatggcttcgac
tataacaagtttctcaaaaaaggaatcccatatatgaacgaagaacaggagaagacaata
aaacacagcatcctaactgggaactggagagttcgcagttctctgcacaaagaccagatc
aaggcggtgatcaacgaggtgacgcgctggctggacctggctgaggaaggcgactggatg
accctccctgatattgctggcttccaagccttcgaggtccagcttgtgctgaggaaggcc
ctccccgacatctggacgatgctgagagaacacggggtgatagtgaagaaagtgagtaaa
cagcatcgctggtatcttgagaacacctcttgtgatcgagagagctgttggaaggagaag
actctcctctctgcaaggggtttctctgtgtttttccagatgctggtgaaagcccagaag
cccttagtgggacataatatgatgatggatctgctgcatctccacgagaagttcttcagg
cctctcccagaaagctacgatgaattcaagctgaacatccacaatctatttcctattctt
atcgacaccaagaatgtgacaaaggacatctggaaggaactgaatttcccaagggtttca
agtctttcagagcttcacgacatcctgaacagtgacttgaatcccacgaaggattctggg
ccagtgattattcacgcaagcaaatgtgagaaatacgttgagacaaagtacccccatgaa
gcagcgtacgatgccttcctctgcggatcagttttcttgagggtggcacacctgcttctc
tggagagtgcacggctctgtgcccatgcctgagccctccttccctctctacctcgatgtg
ctggcgccctatgtgaaccaggtgaatcttatccgagccggggtccccaagatcaatttt
tctggtccagattatcccagcatccgacctcccatcctcatcctgagtgtcaggagctgg
cgtggggtcagcgagcagcaagtctaccgcgagtttcagaatctctgcaaattcgacgtc
aggagactgacacggagccagttcctgctcctgaccaacaagtttaaggatgctcggagc
gtcctgaaggagtacaggggccacccgaccctgcgcgtctccctgtaccggtactggaga
cactccccgaacatcaactgcttgttacaagtctgtggcgtggtcactacctgggccctt
gtcgcctttctccttggaagacctcactcctga
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