Camelus dromedarius (Arabian camel): 105100693
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Entry
105100693 CDS
T04642
Symbol
ARID1A
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
cdk
Camelus dromedarius (Arabian camel)
Pathway
cdk03082
ATP-dependent chromatin remodeling
cdk04714
Thermogenesis
cdk05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
cdk00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105100693 (ARID1A)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
105100693 (ARID1A)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
105100693 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cdk03000
]
105100693 (ARID1A)
03021 Transcription machinery [BR:
cdk03021
]
105100693 (ARID1A)
03036 Chromosome and associated proteins [BR:
cdk03036
]
105100693 (ARID1A)
Transcription factors [BR:
cdk03000
]
Eukaryotic type
Helix-turn-helix
ARID
105100693 (ARID1A)
Transcription machinery [BR:
cdk03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
105100693 (ARID1A)
Chromosome and associated proteins [BR:
cdk03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
105100693 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
105100693
NCBI-ProteinID:
XP_031320303
LinkDB
All DBs
Position
13:19105123..19171507
Genome browser
AA seq
2286 aa
AA seq
DB search
MAAQVAPAAASSLGNPPPPPSELKKAEQQQREEAGGEAAAAAAERGEMKAAAGQESEGPA
VGPPQPLGKELQDGAESNGGGGVGAGGGGPGAEPDLKNSNGNAGPRPALNNNLTEPPGGG
GGGSSDGVGAPPHSAAAALPPPAYGFGQPYGRSPSAVAAAAAAVFHQQHGGQQSPGLAAL
QSGGGGGLEPYAGPQQNSHDHGFPNHQYNSYYPNRSAYPPPPQAYALSSPRGGTPGSGAA
AAAAGSKPPPSSSASASSSSSSFAQQRFGAMGGGGPSAAGGGTPQPTATPTLNQLLTSPS
SARGYQGYPGGDYGGGPQDGGAGKGPADMASQCWGAAAAAAAAAAAASGGAQQRSHHAPM
SPGSSGGGGQPLARTPQPSSPMDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGYPGQPY
GSQTPQRYPMTMQGRAQSTMGGLSYAQQIPPYGQQGPSGYGQQGQTPYYNQQSPHPQQQQ
PPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPPQPPHQQSPTPYPSQQSTTQ
QHPQSQPPYSQPQAQSPYQQQQPQQPASSTLSQQAAYPQPQSQQSQQTAYSQQRFPPPQE
LSQDSFGSQASSAPSMTSSKGGQEDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALSPGVS
TSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGN
QMPPRPPSGQSDSIMHPSMNQSSIAQDRGYMQRNPQMPQYSSPQPGSALSPRQPSGGQMH
AGMGSYQQNSMGSYGPQGSQYGPQGGYPRQPNYNALPNANYPSAGMAGSMNPMGAGGQMH
GQPGIPPYGTLPPGRMSHTSMGNRPYGPNMANMPPQVGSGMCPPPGGMNRKTQETAVAMH
VAANSIQNRPPGYPNMNQGGIMGTGPPYGQGINSMAGMINPQGPPYPMGGTMANNSAGMA
ASPEMMGLGDVKLTPATKMNNKADGTPKTESKSKKSSSSTTTNEKITKLYELGGEPERKM
WVDRYLAFTEEKAMGMTNLPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV
GTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQPKIQPPSPAGSGSMQ
GPQTPQSTSSSMAEGGDLKPPTPASTPHSQIPPLPGMSRSNSVGIQDAFPDGSDPTFQKR
NSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYGTMRKAPGSDPFMSSGQGPNGGMGDPYSR
AAGPGLGNVAMGPRQHYPYGGPYDRVRTEPGIGPEGNMGTGAPQPNLMPSNPDSGMYSPS
RYPQQQQQQQQQRHDSYGNQFSAQGTPSGSPFPSQQTTMYQQQQQNYKRPMDGTYGPPAK
RHEGEMYSVPYSTGQGQPQQQQLPPAQPQPASQQQAAQPSPQQDVYNQYGNAYPATAAAA
TERRPAGGPQNQFPFQFGRDRVSAPPGSNAQQNMPPQMMGGPIQASAEVAQQGTMWQGRN
DMTYNYANRQSTGSAPQGPAYHGVNRTDEMLHTDQRANHEGPWPSHGTRQPPYGPSAPVP
PMTRPPPSNYQPPPSMQNHIPQVSSPAPLPRPMENRTSPSKSPFLHSGMKMQKAGPPVPA
SHIAPTPVQPPMIRRDITFPPGSVEATQPVLKQRRRLTMKDIGTPEAWRVMMSLKSGLLA
ESTWALDTINILLYDDNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDPGQR
TLLDPGRYSKVSSPAPVEEEEEEEEEEEDLLGPKLEEEEEEEVIENDEEMAFSGKDKAAP
ENSEEKLISKFDKLPVKIVQKNDPFVVDCSDKLGRVQEFDSGLLHWRIGGGDTTEHIQTH
FESKTELLPTRPHVPCPPVTRKYAAVEGTPGTAEQEGPPPDGPPEKRITATMDDMLSTRS
STLTEEGAKSVEATKESNKFPFGISPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSLAK
RCVCVSNTIRSLSFVPGNDFEMSKHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQDQ
GVSCNKVEWWWDCLEMLRENTLVTLANISGQLDLSPYPESICLPVLDGLLHWAVCPSAEA
QDPFSTLGPNAVLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYSTMVRFLSDRK
NPVCREMAVVLLANLAQGDSLAARAIAVQKGSIGNLLGFLEDSLAATQFQQSQASLLHMQ
NPPFEPTSVDMMRRAARALLALAKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVL
FLIGQS
NT seq
6861 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcaggtcgcccccgccgccgccagcagcctgggcaatccgccgccgccgccc
tcggagctgaagaaagcggagcagcagcagcgggaggaggcggggggcgaggcggcggca
gcagcagccgagcgcggggaaatgaaggcagccgccgggcaggaaagcgagggccccgcc
gtggggccgccgcaaccgctgggaaaggagctgcaggacggggccgaaagcaatgggggt
ggcggcgtcggagccggcggcggcgggcccggcgcggagccggacctgaagaactcgaac
gggaacgcgggccctaggcccgccctgaacaataacctcacggagccgcccggcggcggc
ggtggcggcagcagcgatggggtgggggcgcctcctcactcagccgcggccgccttgccg
cccccagcctacggcttcgggcaaccctacggccggagcccgtctgccgtcgccgccgcg
gcggccgccgtcttccaccaacaacatggcggacaacaaagccctggcctggcagcgctg
cagagcggcggcggcgggggcctggagccctacgcggggccccagcagaactcgcacgac
cacggcttccccaaccaccagtacaactcctactaccccaaccgcagcgcctaccccccg
cccccccaggcctacgcgctgagctccccgagaggtggcactccgggctccggcgcggcg
gcagcggccgccggctccaagcctcctccctcctccagcgcctccgcctcctcgtcgtct
tcgtcctttgctcagcagcgcttcggggccatggggggaggcggcccctcagcggccgga
gggggaaccccccagcccaccgccacccccaccctcaaccaactgctcacgtcgcccagc
tcggcccggggctaccagggctaccccgggggcgactacggaggcgggccccaggacggg
ggcgccggcaagggcccggcggacatggcctcgcagtgctggggggctgctgctgctgcg
gcggcggcggcggcagccgcctcgggaggggcccaacaaaggagccaccacgcgcccatg
agccccgggagcagcggcggcggggggcagccgctcgcccggaccccgcagccatccagt
ccaatggatcagatgggcaagatgagacctcagccatatggcgggactaacccatactcg
caacagcagggacctccgtcaggaccgcagcaaggacatgggtacccagggcagccatat
gggtcccagaccccgcagcggtacccgatgaccatgcagggccgagcgcagagtaccatg
ggcggcctctcttatgcacagcagattcctccttatggacaacaaggccccagcgggtat
ggtcagcagggccagactccatattacaaccagcaaagtcctcacccccagcaacagcag
cctccctactcccagcagccaccatcccagacccctcacgcccaaccttcatatcagcag
cagccgcagtctcagccaccacagctccagtcctctcagcctccgtattctcagcagcca
ccccagcctccccatcagcagtccccaactccatatccctcccagcagtcaaccacccag
cagcacccccagagccagcccccctactcacagccgcaggcacagtctccctaccagcag
cagcaacctcagcagccagcatcctcgacgctttcccagcaggctgcgtaccctcagccc
cagtctcagcagtcacagcaaactgcctattcccagcagcgcttccctccaccacaggag
ttatctcaagattcatttggatctcaggcgtcctcagccccctcgatgacctccagtaag
ggagggcaagaagatatgaacctgagtcttcagtcaagaccttcaagcttgcctgatctg
tctggttcaatagacgatctccccatggggacagaaggagctctgagccctggagtgagc
acatcagggatttccagcagccaaggggagcagagtaatccagctcagtctcctttctct
ccccatacctcccctcacctgcctggcattcgaggcccctccccgtcgcctgttggctct
cctgccagtgttgctcagtctcgctcaggaccactctcgcctgctgcagtgccaggcaac
cagatgccacctcgacctcccagtggccagtcggacagcatcatgcatccttctatgaac
caatcaagcattgcccaagatcgaggttacatgcagaggaacccccagatgccccagtac
agttccccacagcctggctcagccttatctccacgtcagccttctggaggacagatgcac
gcaggcatgggctcctaccagcagaactccatggggagctatggtccccaggggagtcag
tacggcccacagggaggctaccctaggcagccgaactataatgccttgcccaatgctaac
taccccagtgcaggcatggctggaagcatgaatcctatgggtgctggaggtcagatgcat
gggcagcctggcatcccaccttatggcacactccctccagggagaatgagtcacacctcc
atgggcaaccggccttatggccccaacatggccaatatgccacctcaggttgggtcaggg
atgtgtcccccaccagggggcatgaaccggaaaactcaagaaactgctgtcgccatgcat
gttgctgccaactctatccaaaacaggccaccaggctaccccaatatgaatcaagggggc
ataatgggaactggacctccctatggacaagggattaatagtatggctggcatgatcaac
cctcagggacccccatatcccatgggtggaaccatggccaacaattcagcaggaatggca
gccagcccagagatgatgggccttggggatgtcaagttaactccagccaccaaaatgaac
aacaaggccgatgggacacccaagacagaatccaaatccaagaaatccagttcttctact
acaaccaatgagaagatcaccaagttgtatgagctgggtggtgagcctgaaaggaagatg
tgggtggaccgttacctggccttcacggaggagaaggccatgggcatgacaaatctgcct
gctgtgggtaggaaacctctggacctgtatcgcctctatgtgtctgtgaaggagattggt
ggattgactcaggtcaacaagaacaaaaaatggcgggaacttgcgaccaacctcaatgtc
ggcacctcaagcagtgctgccagctccttaaaaaagcagtacatccagtgtctctatgcc
tttgagtgcaagattgaacggggagaagaccctcccccagacatctttgcagctgctgat
tccaagaagtcccagcccaagatccagcctccctctcctgcaggatcagggtcaatgcag
gggccacagacacctcagtcaaccagcagttccatggcagaaggaggagacctgaagcca
ccaactccagcatccacaccacacagccagatcccccccttgccaggcatgagcaggagc
aattccgtcgggatccaggatgcctttcctgatggaagtgaccccacattccagaagcgg
aattccatgactccaaaccctgggtaccagcccagtatgaatacctctgacatgatgggg
cgcatgtcctacgagccaaataaggatccttatggcaccatgaggaaagctccagggagt
gatcccttcatgtcctcagggcagggccccaacggcgggatgggggacccctatagtcga
gctgccggccctgggctgggaaatgtggcgatgggaccgcgacagcactatccctatgga
ggtccttatgacagagtgaggacggagcctggaataggacccgagggaaacatgggcact
ggagccccacagccgaatctcatgccttccaacccagactcggggatgtattctcctagc
cgttacccccaacagcagcagcagcagcagcagcaacgacatgattcctatggcaatcag
ttttccgctcaaggcaccccttccggcagccccttccccagccagcagaccacaatgtat
cagcagcagcagcagaattacaagcggccaatggatggcacatacggccctcctgccaag
cggcacgaaggggagatgtacagcgtgccatacagcacggggcaggggcagccccagcag
cagcagttgcccccagcccagccccagcctgccagccagcaacaagctgctcagccttcc
cctcagcaagatgtgtacaaccagtatggcaacgcctatcctgccactgccgccgctgct
actgagcgccgaccagcaggcggcccccagaaccagtttccattccagtttggccgagac
cgtgtctcagcaccccccggctccaatgcccagcagaacatgccaccgcaaatgatgggt
ggccccatacaggcatcggctgaggttgctcagcagggcaccatgtggcaggggcgtaat
gacatgacctacaattatgccaacaggcagagcacaggctctgccccccaaggccctgcc
tatcatggagtgaaccgaacagatgaaatgctgcacacggatcagagggccaaccatgaa
ggcccatggccttcccatggcacacgccagcccccatatggtccttctgcccccgtgccc
cccatgacaaggccccctccatccaactaccagcccccaccaagcatgcagaatcacatt
cctcaggtatccagccctgctcccctgccccggccaatggagaaccgcacctctcctagc
aagtctccattcctgcactctgggatgaagatgcagaaggcaggtcccccagtacctgcc
tcacacatagcacctacccctgtgcagccccctatgattcggcgggacatcaccttccca
cctggctctgttgaagccacacagcctgtgttgaagcagaggaggcggctcacaatgaaa
gacatcggaaccccagaggcatggcgggtaatgatgtccctcaagtctgggctgctggca
gagagtacgtgggcattagacaccattaacatcctgctgtatgatgacaacagcatcatg
accttcaacctcagtcagctcccagggttgctagagctccttgtggaatacttccgacgt
tgcctgattgagatctttggcattttaaaggagtacgaggtgggtgacccaggacagaga
acactactggaccctgggagatacagcaaagtgtctagtccagcccctgtggaggaggag
gaggaggaggaggaggaggaggaagaccttctaggtcctaaactagaggaggaagaggag
gaggaagtaattgaaaatgatgaagagatggccttttcgggcaaggacaaggcagcccca
gagaatagtgaggagaaattgattagtaagtttgacaagcttccagtaaagatcgtacag
aaaaatgacccatttgtggtggactgctcagataagcttgggcgtgtacaggagtttgac
agtggcctgctgcactggcggattggtgggggggacaccactgagcatatccagacccac
tttgagagcaagacagagttgctgcctacccggcctcatgtgccctgcccaccagtcacc
cggaagtatgcagcggtagaaggtacaccagggacagcagagcaggagggccccccacct
gatggccctccagaaaaacggatcacagccactatggatgacatgttgtcaacccggtct
agcacgttgaccgaggagggagctaagagtgtagaggccaccaaggaaagcaacaagttt
ccatttggcatcagcccagcacagagccaccggaacatcaagatcctagaggatgaaccc
cacagtaaagatgagaccccactgtgtacccttctggactggcaggattcccttgccaag
cgctgcgtctgtgtctccaataccatccgaagcctgtcatttgtaccaggcaacgacttt
gagatgtccaaacacccggggctgctgctgatcctcggcaagctgatccttctgcaccac
aagcacccagaacggaagcaggcaccactaacttatgagaaggaggaggagcaggaccaa
ggggtgagctgcaacaaagtggagtggtggtgggactgcttggagatgcttcgggaaaac
accttggtcacgctcgccaacatctcggggcagttggacctctccccataccctgagagc
atttgcctgcctgtcctggacggacttctacactgggcagtctgcccttcagctgaagcc
caggaccccttctccactctgggccccaacgccgtcctctccccccagagactggtcttg
gaaaccctcagcaaactcagcatccaggacaacaatgtggacctgattctggccacaccc
cccttcagccgcctggagaagttgtatagcaccatggtgcgcttcctcagtgaccgaaag
aacccggtatgccgggagatggccgtagtactgctggccaacctggcacagggtgacagc
ctggcagcccgagccattgcagtgcagaagggcagcatcggcaacctcctgggcttcctg
gaggacagtcttgctgccacacagttccagcagagccaagccagcctgctccacatgcag
aacccgccctttgagccaactagtgtggacatgatgcgacgggctgcccgtgcactgctg
gccctggccaaggtggacgagaaccactcagagttcacgctgtacgagtcacggctgttg
gacatctcggtatcaccgttgatgaactcattggtttcacaagtcatttgtgatgtactg
tttttgattggccagtcatga
DBGET
integrated database retrieval system
