Camelus dromedarius (Arabian camel): 105101702 Help Entry 105101702         CDS       T04642                                  Symbol SPG11 Name (RefSeq) spatacsin isoform X1   KO K19026   spatacsin Organism cdk  Camelus dromedarius (Arabian camel) Pathway cdk05014   Amyotrophic lateral sclerosis cdk05022   Pathways of neurodegeneration - multiple diseases Brite KEGG Orthology (KO) [BR:cdk00001]  09160 Human Diseases   09164 Neurodegenerative disease    05014 Amyotrophic lateral sclerosis     105101702 (SPG11)    05022 Pathways of neurodegeneration - multiple diseases     105101702 (SPG11)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:cdk03400]     105101702 (SPG11) DNA repair and recombination proteins [BR:cdk03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     Other HR factors      105101702 (SPG11) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Spatacsin_C Motif Other DBs NCBI-GeneID:  105101702 NCBI-ProteinID:  XP_031309018 LinkDB All DBs Position 6:20414543..20495155 Genome browser AA seq 2123 aa AA seqDB search MKLTKFSFQVDRSWKAQLSSLNESIKSSKLEASCCAPWFQDILHLESPESGDQSASVPSW AFIPQGLPHRQYSFPWKSPTKTRDPGRLWKRMHISEQEEPLELACVSVTGFTALFTWSVE RTGCSIALWDLETQAMQCFSLGKKCIPVDSDGDQQLCLVLTENGLCLILFGLTQEEFLNR LMIHGSASTVDSLCHLNGWGRCSIPIHALEAGIENRQLDTVDFFLKSKENLLNPSSKSSV PDQFDNSPSHLYLKNVEELTPALDLLCSAIRENDSETQSKHFSEQLLNLALSFLNKQIKE LFIHNEELDEHLQKGVNILTSYINELRTFMIKFPWKLTDAVDEYDVKENVPKVKESNMWE KLSIEEVVANAILNNKIPEAQTFFRINNHSAQRLKELIKIGLDLVFDSLKKNNIKEASEL LKNMGFNVKDQLLKICFYTTNKNIRDFLVEILKEKKYFSEKEKRTVDFVHQVEKFYSGHF QENMQIQSFPRYWIKEQDFFKHKSVLDSFLKYDHKDKLNKQDHRIVLNWAQWWNQHTQES ILLPRISPEEYKSYSPEALWRYLTAHHDWLSIISWIGEFQTQSSFASLQQNKWPPLTVDV VDQNTCCSNYMKNEILDKLARNGIFLTSELEDFELFLLRLNRIGGVMQDTLPVQNYRSKE GWDFHSRFILYCLEHSLHHLLYVYLDYYKLSPINCPFLEKKELHEAHPWFEFLVQCRHVS SNLTDPKLIFQASLANAQILIPSNQASVSSMLLEGHTLLALATTMYAPGGVSQVVQNEEN ENCLKKVDPQLLKMALTPYPKLRTALFPQYTVPGVLPPDITLYHLIQSLLPFDPRRLFGW QSANTLAIGDVASQLPHFSSPDLVNKYAIAERLNFAYYLHHGRPSFAFGTFLVQELTKSK NPKQLIQQVGNEAYVLGLSSFHIPSIGAACICFLELLGLDSLKLRVDMKVANIILSYKCR NEDAQYSLIRESLAEKISKLAVGEKATVEELLVLLEEGIWNSIEQQEIKRLSSESSSQWA LVVQFCRLHKMKLSTSYLRECAKANDWLQFIIHSQLHNYHPEEVKSLLQYFSPVLQDHLR LAFENLPSVSCSTMDNDQVCNKFPQELQRNKEEMTDFFEILLQCSEVPNSWCWLLAEAVK QQAPILSVLASCLQSQDASAIPCLCVWIITSVEDSVAAEAMGHIKGSVEGHIWDLEDLSV IWRTLLTRQKSKTLIRGFHLFFKDSPLLLMMETYELCMFFKNYKEAEAKLLEFQKSLETL DTAATRVHAVIPAPWLKEQVCFLLKLMLQQCRTQYELGKLLQLFVGIEHLFSDGPDVKKL CVLSQILKDTSIDINRVIITSYSLENFQHECRSILEKLETEGQFALARRVAELAELPVDN LVIEEITQEMQTLKHVDQWSLKQARIDFWKKCHENFKKNCISSKAASSFFSAQALKAREC PTEEGWSCAEERHLLLTLTGHWLAQEDLVPLEELEELEKQIWLCRITQHTLRGNQQEIEP RCSQQMSTSGELTFDSLAREFSFSKLAALNTSKYLELNGLPSKDNCENRLDWKEQESLNF LIGRLLDDGCVHEASRVCRYFHFYNQDVAVVLHCRALASGEASVDDLHPEIHALLRSAEL PEEEEPGFPLRKVQSTSSLDSQSFVMLPPIDEVVSNLETLTSRCLHGKNYCRQVLCLYEL AKELGCSYTDVAAQDGEAMLRAILASQQPDRCRRAQAFISTQGLEPDTVAELVAEEVTRE LLTPSEGTGHKLMFTPAEESQTFLQLTALCQDRTLVGMKLLDKISSVPHGELSCTTELLI LAHHCFTLTCHMEGIIRVLQAARLLTDNHLAPNEEYGLVVRLLTGIGRYNEMTYIFDLLH KKHYFEVLMRKKLDPSGTLKTALLDYIKRCRPGDSEKHNMIALCFSMCREIGENHEAAAC IQLKLIESQPWEDSLKDGHQLKQLLLKALTLMLDAAESYAKDSCVRQALHCHRLTKLITL QIHFLNTGQNTMLINLGRHRLMDCILALPRFYQASIVAEAYDFVPDWAEILYQQVILKGD FNYLEEFKQQRLLRSSIFEEISIKCKHHQPTDLVVKNLKKLFTYCEDVYLYYKLAYEHKF CDVVNVLLKDPQTGCCLKDMLAG NT seq 6372 nt NT seq  +upstreamnt  +downstreamnt atgaaactgaccaagttttccttccaagttgataggtcttggaaagcccagctgtcatca ctgaatgaaagcataaagagctccaaactggaggcttcctgttgtgctccatggttccag gatattctgcacttggagtcccccgaatctggtgaccagagtgccagtgtgccaagctgg gccttcattccccaaggcctgccgcacaggcagtacagttttccatggaaaagtcccacc aagaccagggatccaggaagattatggaaaagaatgcacatcagtgagcaggaggagccc cttgagctcgcatgtgtgtctgtgacaggattcactgcactgtttacttggtcagtagaa aggacgggctgttccattgccctctgggatttggagacccaggccatgcagtgtttttcc ctgggcaaaaaatgcatccctgtagacagtgatggagaccagcagctgtgcctcgttttg acagaaaatggactctgtctgattttgtttggtctgacccaagaggagtttttaaatcga ctaatgatccatggaagcgccagcactgtggactctctttgccatctgaatggttggggg cggtgctccatccccatacacgccctagaggcaggtatagaaaatcgtcagctggacaca gtagatttctttttgaagagcaaggaaaatcttttgaatccatcctcaaaatcttctgta cctgatcagtttgataactctccatcccatttatatttaaaaaatgtggaagagctgaca ccagcattggatttactttgctcggcaattagagaaaatgattctgaaacccaaagcaaa cacttttcagaacagttgcttaatcttgcactgtctttccttaacaaacaaataaaggag ctttttattcacaatgaagagctagatgaacatctacagaaaggagtgaacattttgacc agctacattaacgaacttcgaaccttcatgataaagtttccttggaagctgacagatgct gtagatgaatatgatgtaaaggaaaatgtccccaaagtaaaggagagcaatatgtgggag aaactcagcattgaggaagttgttgccaatgccattttaaacaacaaaataccagaggca cagactttcttcaggattaacaatcattctgctcaaagactcaaggagttgattaaaata ggcttagatttggtctttgacagtttgaaaaagaacaatataaaggaagcctctgagctt ttgaagaatatgggctttaatgtaaaggaccagttgctcaagatatgcttttataccact aataaaaatatacgggactttttggttgaaattttaaaagagaaaaaatatttttctgaa aaagaaaaaagaactgtagacttcgtgcatcaagttgagaagttttattcaggacatttc caagaaaatatgcagatccagtcctttcccaggtattggataaaggaacaagattttttc aagcacaagtctgttttggactcgttcctgaaatatgatcataaagataaacttaacaaa caagatcatagaattgtgttaaattgggctcagtggtggaatcaacacacgcaagaatcc atccttctccccaggataagtccagaagaatacaaatcgtattctcctgaagccctctgg agatacctcacagctcaccatgattggctcagcattatctcatggattggagaatttcag acccagagtagtttcgcttcacttcagcagaacaaatggccccctctgactgttgatgtt gttgatcagaatacttgttgcagcaactacatgaagaatgaaattttagataagctggcc aggaatgggatttttcttacatctgaactagaagactttgaactctttcttctaagactg aaccgtattgggggtgtgatgcaagatacccttcctgttcaaaactataggtccaaagaa ggttgggatttccattctcgtttcatcctctattgtttggagcacagtctgcatcatctt ctttatgtctatctcgactattacaaacttagtcctataaattgtccctttttggaaaaa aaagaattacatgaagctcacccttggtttgaatttttagttcagtgtcggcacgtttcc agtaatttaacagatcccaaactgatctttcaggctagccttgcaaatgctcagatactg attcccagcaaccaggccagtgtaagcagtatgctgttggaaggacataccctcctggcc cttgctaccacaatgtatgcccctgggggtgtcagccaggttgttcagaatgaagaaaat gagaactgtttgaagaaagtagatccccagctactgaagatggcattaactccttatccc aagcttagaactgctctcttcccacagtacactgttcctggtgtcctgccgcccgatatt acactctaccaccttattcagtcattattgccctttgatcctaggagactgtttggctgg cagtctgccaacacactggctataggagatgtagcaagtcagcttccacatttctctagc cccgacctggtgaataaatatgctatagcagaacgtctgaattttgcttattatttacat cacggacggccatcatttgcgtttggtacttttctggttcaggaattaaccaagagcaag aatcccaagcagctgatccagcaagtaggcaatgaagcctatgttttagggctctcctcc ttccacataccttcaataggagcagcctgtatttgtttcttagaattgcttggcctcgac agcctcaagctcagagttgatatgaaagtggccaatataattttgagctacaagtgtaga aatgaagatgctcagtacagccttatcagagagtctctagctgaaaaaatatctaaactg gctgtgggtgaaaaggcaaccgtagaagaattgcttgttctcttagaagaaggtatatgg aacagcattgagcagcaggaaataaagaggttatccagtgaatccagcagccagtgggca ttagtggtacagttctgcaggctccacaagatgaaactgagtacatcttaccttagagaa tgtgccaaagcaaacgactggttacagtttattattcacagtcagctccacaattaccac ccagaggaggtgaaatctcttctccagtatttcagccctgtccttcaagaccacttaaga ctggcttttgagaacttaccctcagtgtcctgctccacaatggacaatgatcaagtctgc aacaagttcccacaggaactccaaagaaacaaagaagagatgactgatttctttgaaatt ctgctccagtgctcagaggtgccaaactcctggtgctggctcctggccgaagcagtgaaa caacaggccccaatccttagtgtcctggcctcatgtctccagtcgcaggatgccagtgct attccctgtctctgtgtttggatcatcacttctgtggaggacagtgttgcagctgaagca atgggacacattaagggctcagtggagggccacatctgggaccttgaggacctctcagtc atctggagaacattattaacaaggcagaagagcaaaactctcatcagaggtttccacctt ttctttaaggactccccactactattgatgatggagacgtatgaactgtgtatgttcttc aagaattataaggaagccgaagctaaacttctggagttccagaagagccttgaaactctt gatacggcagccacaagggtccacgcggtcatccctgccccatggctgaaggagcaggtg tgttttcttttgaagcttatgctgcagcagtgcaggacccagtatgagctggggaagctt ttacagctgtttgtgggaatagagcatctcttctctgatggtccagatgtaaagaagctg tgtgtccttagccagattttgaaggatacatccatagacattaatcgtgtaattattacc agctacagccttgagaattttcagcatgaatgtagatcaattttggaaaaactggagaca gaaggacagtttgctttggccaggagggtagcagaactcgccgaactacctgtggacaac ttggttattgaagagataacacaggaaatgcagaccttaaaacacgttgaccagtggtcc ctgaaacaagcaagaattgacttctggaaaaaatgtcatgagaattttaagaaaaattgc atttcaagcaaagcagcatcttcctttttctcagcccaggctctgaaggcacgtgagtgc cccactgaggagggatggagctgcgctgaggagcgccatctgctgctcaccctgacggga cactggcttgcccaggaggacctggtgccgctggaggagctggaggagctggagaagcag atctggctctgccgcatcacccagcacaccctcaggggaaaccagcaggaaatagagccc aggtgttctcaacagatgtcaactagtggtgaacttacctttgatagtttagccagagag ttttcattttctaagttggctgctctgaacacatcaaaatacttagaacttaatggcctt ccttccaaagacaattgtgagaacagactagattggaaggagcaagagtccctaaacttt ttgattgggcgcctgctggatgatggctgtgtgcatgaagcaagtagagtgtgccgctat tttcatttctacaaccaggatgtcgccgtggtactgcactgcagagcactggcttcaggg gaggctagtgtggatgacctgcacccagagatccatgccctcctgcgaagtgctgagctg cctgaggaggaagaacctggctttcctctcaggaaagtccaaagcacatcaagtttggat agtcagtcatttgtgatgctgccccccattgatgaagtggtgtctaatctggaaactctg acaagcagatgcctccatgggaagaattattgccggcaggtcctctgtctgtatgaactt gccaaggagctgggctgttcctacacagatgtcgccgctcaggatggcgaggccatgctc cgggcaatcttggcttctcagcagcccgaccgatgcaggcgagcccaagccttcatcagc acccagggcctcgagccagacacagtggctgaactagtggctgaagaggtgacccgggag ctgctgaccccatcagagggaacaggacataagctgatgttcactccagcagaggaaagc cagacgtttcttcagctgaccgctttgtgtcaagaccgcaccttggtaggcatgaagttg ctggataagatttcctctgttccccacggagaattgtcttgcaccacagagctgctgatc ctggctcatcactgcttcacactgacgtgccacatggagggcatcatccgagtcctgcag gccgcccggctgctcacagacaaccacttggcccccaatgaggagtacgggctggtggtg cgtctcctcactggcattggaaggtacaatgagatgacatacatatttgatttgctgcat aaaaagcactattttgaagtgctgatgaggaagaagttggatccgagcggtaccctcaag acggccctactggactacatcaaacgctgccgccccggggacagtgagaagcacaacatg attgccctgtgcttcagcatgtgccgggagatcggggagaaccatgaggcagccgcctgc atccaactgaagttgattgagtctcagccctgggaggacagcctcaaggacgggcatcag ctgaagcagctgctgctgaaggccctgacactgatgctggatgcagcagagagttatgcc aaggactcctgtgtgcgacaggccctgcactgtcaccggctcaccaagttgataacactg cagattcactttctgaacactggccagaacacgatgctcatcaacctgggccgccacagg ctgatggactgtatcttggcccttcctcggttctaccaggcttctattgtggctgaggcc tatgactttgttcctgattgggctgaaattctataccaacaagtgattcttaaaggagac tttaactacctggaagaatttaagcaacaaaggttattgagatccagtatatttgaagag atttcaataaaatgtaaacatcatcagcctactgacttggttgtgaaaaatctgaagaag ttattcacgtattgtgaagatgtctacttatattacaagctggcatatgaacacaaattt tgtgacgttgtaaatgtgcttctgaaggaccctcagacaggttgctgtctaaaggatatg ctagcaggttag

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