Camelus dromedarius (Arabian camel): 105101899
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Entry
105101899 CDS
T04642
Symbol
FDFT1
Name
(RefSeq) squalene synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
cdk
Camelus dromedarius (Arabian camel)
Pathway
cdk00100
Steroid biosynthesis
cdk01100
Metabolic pathways
Module
cdk_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
cdk00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
105101899 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cdk01006
]
105101899 (FDFT1)
Enzymes [BR:
cdk01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
105101899 (FDFT1)
Prenyltransferases [BR:
cdk01006
]
Terpene biosynthesis
Squalene/phytoene synthase
105101899 (FDFT1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Octopine_DH
HAUS4
Motif
Other DBs
NCBI-GeneID:
105101899
NCBI-ProteinID:
XP_031297970
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Position
31:complement(4933175..4963821)
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AA seq
417 aa
AA seq
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MEFVKCLGHPEEFYNLLRFQMGGRQKVIPKMDQDSLSSSLKTCYKYLNQTSRSFAAVIEA
LDGEMRHAVCIFYLVLRALDTLEDDMTISIEKKVPLLHNFHSYLYEPDWRFTESKEKDRQ
VLEDFPTISLEFRNLAEKYQTVIVDICRKMGFGMAEFLDKQVTSAQEWDKYCHYVAGLVG
IGLSRLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQREGREFWPREVWGKYV
KKLGDFAKPENVDVAVQCLNELITNTLHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATL
AACYNNQQVFRGVVKIRKGQAVTLMMDATNMPAVKAIIHQYMEEIYQRIPDSDQCSGKTR
QIISTIRTQNLPNCQLISRSHYSPIYLSFVMLLAALSWQYLSALSQVTEDYVQTGEH
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggagttcgtgaagtgcttggggcacccggaggagttctacaacctgctgcgcttccag
atggggggccggcagaaggtgatacccaagatggaccaggactcgctcagcagcagcttg
aaaacttgctacaagtatctgaatcagaccagtcgcagtttcgcagctgttatcgaggcg
ctggatggggaaatgcggcatgcagtgtgcatattttatttggttctccgagctctggac
actctggaagatgacatgaccatcagtatcgaaaaaaaggtccccctgttacacaacttc
cactcgtacctttatgagcccgactggcggttcacggagagcaaggagaaggaccgacaa
gtgctggaggactttcccacgatctccctggagttcagaaatctggctgagaaatatcaa
acggtgattgttgacatttgccggaagatgggatttgggatggcggagtttttggataag
caagtgacgtctgcacaggagtgggacaagtactgtcactacgtggctgggctggtgggg
attggcctttcccgtctattctcggcctcagagtttgaagaccccttagttggtgaagac
acagagcgcgccaactccatgggcctgttcctgcagaaaacaaacatcattcgtgactat
ctggaagaccagcgagaaggaagggagttttggcctcgagaggtttggggcaagtacgtg
aagaagctgggcgactttgctaagccagagaacgttgacgtggccgtacagtgcctgaac
gagctgataaccaacacgttgcaccacatcccggatgtcatcacctacctctcacggctg
agaaaccagagtgtgtttaacttctgcgctattccgcaggtcatggccattgctactttg
gccgcctgttacaataatcagcaggtgttcagaggggtggtgaagattcggaaagggcaa
gcagtcaccctgatgatggatgccaccaacatgccagctgtcaaagctataatacaccag
tacatggaggagatttatcagagaatccctgactccgaccaatgttctggtaaaacaagg
cagatcatctccacgatcaggacacagaatcttcccaattgccagctcatctcccggagc
cactactcccccatctacctgtcatttgtcatgctcctggcggccctgagctggcagtac
ctgagcgccctgtcccaggtcacagaggactacgttcagaccggcgagcactga
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