Camelus dromedarius (Arabian camel): 105103925
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Entry
105103925 CDS
T04642
Symbol
HTT
Name
(RefSeq) LOW QUALITY PROTEIN: huntingtin
KO
K04533
huntingtin
Organism
cdk
Camelus dromedarius (Arabian camel)
Pathway
cdk05016
Huntington disease
cdk05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
cdk00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
105103925 (HTT)
05022 Pathways of neurodegeneration - multiple diseases
105103925 (HTT)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdk03019
]
105103925 (HTT)
04131 Membrane trafficking [BR:
cdk04131
]
105103925 (HTT)
03029 Mitochondrial biogenesis [BR:
cdk03029
]
105103925 (HTT)
Messenger RNA biogenesis [BR:
cdk03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
105103925 (HTT)
Membrane trafficking [BR:
cdk04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
105103925 (HTT)
Mitochondrial biogenesis [BR:
cdk03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
105103925 (HTT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_2
HEAT_EF3_N
Death_3
Motif
Other DBs
NCBI-GeneID:
105103925
NCBI-ProteinID:
XP_031294236
LinkDB
All DBs
Position
2:complement(121836315..121959561)
Genome browser
AA seq
3140 aa
AA seq
DB search
MATLEKLMKAFESLKSFQQQQQQQQQQQQQLQPPQPQPQPQPPPPLQXPSPAPPAQPPPQ
PQPPPPXPPPGPAVAEEPLHRPKKELSATKKDRVNHCLTICENIVAQSLRNSPEFQKLLG
IAMELFLLCSDDAESDVRMVADECLNKVIKALMDSNLPRLQLELYKEIKKNGAPRSLRAA
LWRFAELAHLVRPQKCRPYLVNLLPCLARASKRPEESVQETLAAAVPKIMASFGNFANDS
EIKVLLKAFIANLKSSSPTVRRTAASSAVSICQHSRRTQYFYSWLLSVLLGLLIPVGEEP
STLLTLGVLLTLRYLVPLLQQQVKDTSLKGSFGVTQKEMEVSPSAEQLGQVYELTLHYTQ
HQDHNVVTGALELLQQLLRTPPPELLQALTSAGGLGQLTATKDEPSCRSRSGSIVELLAG
GGSSCSPVLSRKQKGKVLFGEAATLEDDSESRSDGSSPAFTASVKDELSGELAASSGVST
PGSAGSAADPGGHDIITEQPRSQHTLQPDSADLTGCDLASTATDGDEEDILSHSSSQMSA
VPSDPAMDQNDGTQASSPVSDSSQTTTEGPDSAVTPSDSSEIVLDGADGQCAGIQAGQSQ
DQDEDEDVAGALPDEDSSRSSSAALRPAHLLRSPGHSRQPSNRSLDKVASRDGAAEPGDQ
ESKPCRIRGDIGQSTDDESAPLVHCVRLLSASFLLTGEKNALAPDRDVRVSVKALALSCV
GAAVALHPESFFSTLYKVPLDTVECPDEQYVSDVLNYIDHGDPQVRGATAILCGTLVSSI
LSRSRFHAGDWMGTVRTLTGNTFSLADCIPLLQKTLKDESSVTCKLACTAVRLCVAALCG
SSYSRWGLQLITDLLALRSSSYWLVRTELLETLAEIDFRLVSFLEAKADSLHRGAHHYTG
FLKLQERVLNNVVIHLLGDEDPRVRHVAAASLTRLVPKLFYKCDQGQADPVVAVAREQSS
VDLKLLMHEVQPPSHFSVSTVTRIYRGYNLLPSIADVTVENNLSRVIAAVSRELVTSTTR
ALTFGCCEALCLLSAAFPVCVWSLGWHCGVPPLSASDESRKSCTVGMVTVILTLLSSAWF
PLDLSAHQDALILAGNLLAASAPRSLRSSWTSEEEASPAATKQEEAWPALGDRALVPVVE
QLFSHLLKVLNICAHVLDDVAPGPAIKAALPSLTNPPSLSPIRRKGKEKEAGEPPSVPVS
PRKGGEASPASRQSDTPGPVTANKSSSLGSFYHLPSYLKLHDVLKATHANYKVTLDLQSS
TEKFGGFLRSALDVLSQVLELATLQDIGKCVEEILGYLKSCFSREPTMATVCVQQLLKTL
FGTNLASQFDGLSSNPSKSQGRAQRLGSSSVRPGLYHYCFMAPYTHFTQALADASLRNMV
QAEQDRDPSGWFDVLQKVSTQLKTNLSGVTKHRADKNAVHNHIRLFEPLVIKALKQYTTT
TSVQLQKQVLDLLAQLVQLRVNYCLLDSDQVFIGFVLKQFEYIEVGQFRESEAIIPNIFF
FLVLLSYERYHSKQIIGIPKIIQLCDGVMASGRKAATHAIPALRPIVHDLFVLRGTNKAD
AGKELETQKEVVVSMLLRLIQYHQVLEMFVLVLQQCHKESEDKWKRLSRQVADVILPMLA
KQQMHVDSHEALGVLNTLFEILAPSSLRPVDMLLRSMFVTPDTLASVSTVQLWVSGILAI
LRVLVSQSTEDIVLARVQELAFPPCLLSCPVVSRLRGGGGGSVPEEHSEGGQAKSPPEET
FSRFLLQLVGILLEDIVTKQLRVEMSEQQHTFYCQELGTLLMCLIHIFKSGMFRRITAAA
SRLFTEGADGSFYGLECLNAWVRSMVPTHPALVLLWCQILLLVSHTDYRWWAEVQQTPKR
RSLSGTKSLSPPVSGEEEDSTLASSLGVCNREIVRRGALILFCDYVCQNLHDSEHLTWLI
VNHVQDLITLSHEPPVQDFISAVHRNSAASGLFIQAIQSRCENLSTPTALKKTLQCLEGI
HLSQSGAVLTLYVDKLLCTPLRVLARMVDTLACRRVEMLLAANLQSSTAQVPVEELNRMQ
EYLQSSGLAQRHQRLYSLLDRLRLATAPGSRGPAPLATPHPLDGDGPLVLETVIPDKDWY
IRLVRSQCWTRSDSALLEGAELVNRIPPSDLSAFMMHTEFNLSLLAPCLGLGVREVRGGQ
KSPLFEAARMATLDRVTGVVQQLPDTHQVFQPFLPVEPTTYWSKLDDLFGDATLYRSLTT
LARALAQFLLLFPKLPGHLHLPPEKEHDTVKFVVVTLEALSWHLVHERIPLSLDLQAGLD
CCCLALQLPSLWSALSSPEMVTHACSLIHCVRFILEAIVVQPGDQLLGPEGRTNTPKAAR
EDEVDSDAPTPQCVTAACVMVAEMVESLPSVLALGHERSRSTPAFLTPVLRNIVVSLARL
PLVNSYTRVPPLVWKLGWSPTPGGDFGTVFPEIPVEFLQEKEVFKEFIFRVNTLGWTSRT
QFEETWATLLGVLVTQPLVMEQEESPPEEDTERTQIHVLAVQAITSLVLSAMTVPVAGNP
AVSCLEQQPRNKPLKALDTRFGRKLSIVRGVVEQEIQAMVSKRENIATHHPYQAWDPVPS
LSPATTGALVSHDKLLLQINPERELGSTGYLLGQVSIHSVWLGNSITPLREEEWDEEEEE
EADTPAPTSPPTSPVNSRKHRAGVDIHSCSQFLLELYSRWILPSGSARRTPAVLMSEVVR
SLLVVSDLFTERNQFEMMYLTLSELRRVHPSEDEILLQYLVPATCKAAAVLGMDKAVAEP
VGRLLESALRSSHLPSRVGALHGVLYVLECDLLDDTAKQLIPVVSDYLLSSLKGIAHCVN
THSQQHVLVMCATAFYLIENYPLDVGPEFSASIIQMCGVMLSGSEESTPSIIYHCILRGL
ERLLLSEQLSRLDAESLVKLSVDRVNAHSPHRAMAALGLMLTCMYTGKEKASPGRSSGPG
AAAPDSESVIVAMERVSVLFDRIRKGFPCEARVVARILPQFLDDFFPPQDVMNKVIGEFL
SNQQPYPQFMATVVHQVFQTLHSTGQSSMVRDWVMLSLSNFTQRTPVAMAVWSLSCFFVS
ASTSPWVSAILPHVVSRMGKLERVDVNLFCLVAADFYRHQIEEELDRRAFQSVFEVVAAP
GNPYQRLLTCLQNVHKVATH
NT seq
9423 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccctggaaaagctgatgaaggccttcgagtccctcaagtccttccaacagcag
cagcagcagcagcagcagcagcagcaacagctgcagccgccgcagccgcagccgcagcca
cagccgccgccgccgctccagnccccctcaccagcaccgccggcgcagccgccgcctcag
ccgcagccgccgcccccgnccccgccgcccggcccggccgtggccgaggagccgctgcac
cgaccaaagaaagaactctcagccaccaagaaagaccgtgtgaatcactgtctgaccata
tgtgaaaacatagtggcgcagtctctcagaaattctcctgagtttcagaaacttctgggc
atcgccatggaactttttctgctgtgcagcgatgacgctgagtcagatgtcaggatggtg
gctgacgaatgcctcaacaaggtcataaaggctttgatggattctaatctcccaaggtta
cagttagaactctacaaggaaattaaaaagaatggagctcctcggagcctgcgcgctgcc
ctgtggaggttcgctgagctggctcacctggttcgccctcagaaatgcaggccctacttg
gtgaaccttctgccttgcctggctcgagcgagcaagaggcccgaggagtctgttcaggag
accttggctgccgctgtgcctaaaattatggcttcttttggcaattttgcgaacgacagt
gaaattaaggttctgctcaaggctttcatagcgaatctgaagtccagctcccctaccgtg
cggcgcacggcggccagctctgcggtcagcatctgccagcactctcggaggacgcagtac
ttctacagctggctgctgagcgtgctcctaggtttgctcattcctgttggggaggaaccc
tccaccctcctgactctcggggtgctgctcacactgaggtacttggtaccgttgctgcag
cagcaggtcaaggacacgagcctcaaaggcagctttggggtgacccagaaagaaatggaa
gtctccccgtcggcggagcagcttggccaggtttacgagctgaccttgcattacacgcag
caccaagaccacaacgttgtgacgggcgcactggaactcctgcagcagctcctccgaacc
ccgccacccgagctcctgcaggcgctgacctcggcgggcggccttgggcagctcaccgcc
actaaggacgagcccagctgtcggagccgcagtgggagcatcgtggagcttctggctgga
gggggttcctcatgcagccctgtcctttcaagaaaacaaaaagggaaggtgctctttgga
gaagcagccaccctggaggacgactctgagtctcggtcggacggcagcagccctgccttc
acagcctcagtcaaggatgagctcagcggagagctggctgcctcttccggggtctccact
cccggctcggccggctcggccgccgaccccgggggccacgacatcatcaccgagcagccc
cgctcacagcacaccctgcagccggactcggcggacctgacgggctgcgacctggcgagc
actgccaccgacggcgacgaggaggacatcttgagccacagctccagccagatgagcgcc
gttccatccgaccccgccatggaccagaacgacgggacccaggcctcctcacccgtcagt
gacagctcccagaccaccaccgaagggcctgactccgccgtgaccccttcagacagctct
gagattgtgttagacggtgccgacggccagtgtgcggggatacaggcggggcagtcgcag
gaccaggacgaggacgaggacgtggcaggcgcccttcctgatgaggactcttccagaagc
tcttctgccgcccttcgtccagcgcatttactgagaagcccgggccacagcaggcagccc
tccaaccgcagcctagataaggtcgcctcgagggatggagctgccgagccgggagatcaa
gaaagcaagccgtgccgcatcagaggggacataggccagtccactgatgacgagtctgct
cctcttgtccactgtgtccgccttttatctgcttcgtttttgctaacaggggaaaaaaat
gccttggctccggacagggacgtgagggtcagcgtgaaggcgctggcactcagctgtgtt
ggcgccgctgtggcccttcaccccgagtctttcttcagcacactgtataaagtccctctg
gacaccgtggaatgccctgacgagcagtacgtgtcagacgtgttgaactacatcgaccac
ggagacccacaggtcagaggagccacagccattctctgtgggaccctcgtctcctccatc
ctgagcaggtcacgcttccatgcgggagactggatgggcactgttcggactctgacggga
aacacattttctctggcggactgcattcctttgctgcagaaaactttgaaggatgaatct
tctgttacttgcaagttggcttgcacagctgtaaggctctgcgtcgctgctctctgcggc
agcagctacagccggtggggcctgcagctcatcaccgacctgctcgccctgaggagcagc
tcctactggctggtgaggactgagctcctggagaccctcgccgagatcgacttcaggttg
gtgagctttttggaggcaaaagcagacagcctacacagaggggctcaccattacaccggg
tttctaaaactgcaggagcgagtgctcaataacgtcgtcatccacttgctcggggatgaa
gaccccagggtgcgacacgtcgccgcggcttcattgacgaggcttgtcccaaagctgttc
tacaagtgtgaccaaggacaggctgacccggtggtggccgtggcgagggagcaaagcagc
gttgacctgaagcttctcatgcacgaggtgcagcctccgtcccacttctccgtcagcacc
gtgaccagaatatatagaggctataacttactaccgagcatagcagatgtcactgtggaa
aataacctttcgagagttatcgcagcagtgtctcgtgaactagtcacgtcgaccacgaga
gcgctcacatttggatgctgcgaagctttgtgtcttctctccgctgccttcccagtgtgc
gtttggagcctaggctggcactgcggagtgcccccgctgagcgcctccgacgagtctagg
aagagctgcactgtcgggatggtcaccgtgatccttaccctgctctcgtcagcctggttc
ccgctggacctctcggcgcatcaggatgctttgattttggccgggaacctgcttgcagcc
agtgcccccaggtctctgagaagttcgtggacctctgaagaagaggccagccccgcagcc
accaagcaggaggaggcctggccggctctgggtgaccgggccttggtgcccgtggtggag
cagctcttctcccacctgctgaaggtgcttaatatctgtgcgcacgtcctggacgatgtg
gctcctggaccggcgatcaaggccgccctgccgtctctgaccaaccccccttctctgagt
ccaatccggcggaaggggaaagagaaggaggctggggagccgccgtctgtgcccgtgagc
cccaggaaaggcggtgaggccagtccagcctctcgacaatctgataccccaggacctgtc
acagcaaacaagtcctcatcactggggagtttctatcaccttccttcgtacctcaaattg
cacgatgtcctgaaagctactcacgcaaactacaaggtcaccttggatcttcagagcagc
accgagaagttcggggggtttctgcgctctgccttggatgtcctctctcaggtcctcgag
ctggcgactctgcaggacatcgggaagtgtgttgaggagatcctcgggtacctaaagtcc
tgcttcagtcgggagccgacgatggcgactgtgtgtgtccagcagttgttgaagaccctc
tttgggacaaacttggcctcccagtttgatggcttgtcttccaaccccagcaagtctcaa
ggccgagcgcagcgccttggctcttccagcgtgaggcccggcttgtaccattactgcttc
atggctccatacacccacttcacccaggccctcgccgatgccagcctgaggaacatggtg
caggccgagcaggaccgcgacccctccgggtggtttgacgtgctccagaaggtgtctacc
cagctgaagacaaacctcagcggcgtcacgaagcaccgtgcagacaagaatgctgttcat
aatcacattcgtttatttgagcctcttgtcataaaagctttaaaacagtacacgaccacg
acctcggtgcagttacagaagcaggttttggatttgctggcacagctggttcagttgcgg
gttaattactgcctcctggattccgatcaggtgttcattggatttgtgctgaagcagttt
gagtacattgaagttggccagtttcgggaatcagaggcgattattccaaacatctttttc
ttcctggtattgctgtcttacgaacgctatcactcaaagcagatcattgggatccctaag
atcatccagctctgtgacggcgtcatggccagtggcaggaaggctgcgacgcacgccatc
ccggccctgcggcctatagtccacgacctcttcgttttaagaggaaccaacaaagctgat
gcaggaaaagagcttgaaacccagaaggaggtggtggtgtccatgttactgagactcatc
cagtaccatcaggtgctggagatgttcgtcctggtcctgcagcagtgccacaaggagagc
gaagacaagtggaagcggctgtcccgacaggtggccgacgtcatcctcccgatgctggcc
aagcaacagatgcacgttgactctcacgaagcccttggagtgttaaacactttgtttgag
attctggccccgtcctccctccgccccgtggacatgctgctgcggagcatgtttgtcact
ccagacacactggcctctgtgagcaccgttcagctgtgggtgtcgggaatcctggccatc
ctaagggtgctggtctcccagtccaccgaggacatcgttcttgcccgtgttcaggagctc
gccttccctccatgtctgctctcctgccccgtcgtcagtaggctgagaggtgggggcggt
ggctcggtgccggaggaacacagtgagggaggacaagcgaagagtccgccagaggaaacg
ttttccaggtttctactgcagctggttggcatccttttagaggacattgtcacaaagcag
ctaagagtggaaatgagtgaacagcagcatactttttattgccaggagctaggcaccctg
ctcatgtgtctgatccacatcttcaagtccgggatgttccggagaatcacggcagctgcc
tctagactcttcaccgagggcgccgacggcagtttctacggcctggagtgcttgaatgcc
tgggtgcgctccatggtccccacccacccggccctcgtgctgctctggtgccagatcctg
ctgctggtcagccacaccgactaccgctggtgggcggaggtgcagcagacccccaagaga
cgcagtctgtccggcacgaagtctctcagccccccggtgtctggagaggaggaggattcc
accttggcttccagcctgggcgtgtgcaacagagaaattgtgcggcggggagccctcatc
ctcttctgcgactatgtttgccagaacctgcatgactcagaacacctgacgtggctcatc
gtgaaccacgttcaggacctgatcaccctgtcccacgagccccccgtgcaggacttcatc
agtgctgtccaccggaattccgcggccagcggccttttcatccaggccattcagtctcgc
tgtgaaaatctttcaactcccactgctctgaagaagaccctccagtgcctggaggggatc
cacctgagccagtcgggcgccgtgctgacactgtacgtggacaagctcctgtgcaccccg
ctccgtgtgctggctcgcatggtcgacacccttgcttgtcgccgggtagagatgcttttg
gctgcaaatttacagagcagcacagcccaggtgccagtggaagaactaaacagaatgcag
gagtaccttcagagcagcgggctagctcagaggcaccagcggctctactccctgctggac
aggctccgtctcgccaccgcgccagggtcgcgtggccccgctcctctggccacaccccac
ccgctggacggggatgggcccctggtgctggagacagtgattccagacaaggactggtac
atacgtctggttaggtcgcagtgctggacacggtcggactctgcactgctggaaggggca
gagctggtgaatcggatcccgcccagcgacctgagcgcgttcatgatgcacacggagttc
aacctgagcttgctggccccgtgcttgggcctgggcgtgcgcgaggtccgtggaggccag
aagagccccctgtttgaagcggcccgcatggcgacactagaccgtgtgacaggtgtggtc
cagcagctccccgacacccaccaggttttccagccctttctgcccgtggagcccaccacc
tactggagcaagctggatgatctctttggggacgccacgctgtaccggtccctgaccacg
ctggcccgggccctggcccagttcctgctgctcttccccaagctgcccggacacttgcac
cttcctcctgagaaggagcatgacaccgtgaagtttgtggtcgtgactctcgaggcgctg
tcctggcatttggtccacgagcggatcccactgagtttggacctgcaggcgggcctggac
tgctgctgcctggctctgcagctgcccagcctctggagcgccctctcctctccggagatg
gtgacccacgcctgctccctcatccactgtgtgcgcttcatcctggaagccattgtggtg
cagcctggggaccagcttcttggtccagaaggaaggacgaacaccccaaaggctgccaga
gaggacgaagtggactcagacgctccgactcctcagtgtgttactgccgcctgtgtgatg
gtggctgagatggtggagtccctgccgtcggtgttggccttgggtcatgaaaggagccgc
agcaccccggcgttcctcacgccggtgctccggaacatcgtcgtcagcctggcccgcctg
cccctggtgaacagctacacgcgcgtcccgcccctggtgtggaagcttggatggtcaccc
acaccaggaggggattttggcacagtgttccccgagatccccgtggagttcctccaggaa
aaggaagtcttcaaagagttcatcttccgcgtcaatacgctggggtggaccagccgcacc
cagtttgaggaaacatgggccaccctccttggtgtgctggtgactcagccccttgtgatg
gagcaggaggagagcccgccggaggaagacacggagaggacccagatccacgtcctggcc
gtgcaggccatcacctccctggtgctgagcgcgatgactgtgcccgtggccggcaaccca
gccgtgagctgcttggaacagcagccccggaacaagcccctgaaagccctggacaccagg
tttgggaggaagctgagcattgtcagaggagttgtggagcaggagatccaagcgatggtg
tccaagagagagaacatcgccacccaccacccgtaccaggcctgggaccccgtgccgtct
ctgtccccagccaccacaggtgccctcgtcagccacgacaagctcctgctgcagatcaac
cccgagcgggagctggggagcacgggctacttgcttggccaggtgtccatccactctgtg
tggctggggaacagcatcacgccactgagggaggaggagtgggacgaggaggaggaggag
gaggccgacaccccggctccgacgtcaccacccacatctccagtcaactccaggaaacac
cgggctggagttgacatccactcctgttctcagtttttgcttgagctgtacagtcgttgg
atcctgccgtcgggctcagccaggaggacccccgccgtcctgatgagcgaagtggtccga
tctcttctcgtggtctcagacttgttcacggagcgcaaccagtttgagatgatgtatctg
acgctctcagagctgcggagggtgcacccttctgaagacgagattctccttcagtacctt
gtgcccgccacctgtaaggctgccgccgtccttgggatggacaaggctgtggcagagcca
gtcggccggctgctggagagcgcactgaggagcagtcacctgcccagcagggtgggagcc
ctgcacggcgtcctctacgtgctggagtgcgacctcctggatgacaccgccaagcagctt
atccccgtcgtcagcgactatctcctctccagcctcaagggcatcgcccactgcgtaaac
acccacagccagcagcacgtgctggtgatgtgcgccactgccttctacctgattgagaac
taccctctggacgtcgggccagagttctctgcgtccataatccagatgtgtggggtgatg
ctgtccggaagcgaggagtccactccgtccatcatctaccactgcatcctgaggggcctg
gagcgcctcctgctctccgagcagctctcccggctggacgcagagtctctggtcaagctg
agcgtggacagggtgaacgctcacagcccgcaccgggccatggcggccctgggcctgatg
ctcacctgcatgtacaccggaaaggagaaggccagtccaggcagaagctcagggcccggc
gctgctgcccctgacagcgagtctgtgattgtggccatggagcgcgtgtctgtcctcttc
gataggatcaggaaggggttcccctgtgaagccagggtggtggcacggatcctcccccag
tttctcgacgacttcttcccaccccaggacgtcatgaacaaggtcattggagagttccta
tccaaccagcagccatacccacagttcatggccactgtggtgcaccaggtgttccagacg
ctgcacagcacggggcagtcgtccatggtccgggactgggtcatgctgtccctctccaac
ttcacgcagaggaccccggtcgccatggccgtgtggagcctctcctgcttcttcgtcagt
gcttccaccagcccgtgggtttcagcaatccttccccacgtggtcagcagaatgggcaag
ctggagcgggtggacgtgaaccttttctgcctggtggccgcagacttctacagacaccag
atagaggaggagctggaccgcagggccttccagtctgtgtttgaggtggtggcggcacca
ggaaacccatatcagcgactgctgacttgtttgcagaatgtccacaaggttgccacgcac
tga
DBGET
integrated database retrieval system
