Camelus dromedarius (Arabian camel): 105104165
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Entry
105104165 CDS
T04642
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1 isoform X1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
cdk
Camelus dromedarius (Arabian camel)
Pathway
cdk03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cdk00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
105104165 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdk03021
]
105104165 (POLR1A)
Enzymes [BR:
cdk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
105104165 (POLR1A)
Transcription machinery [BR:
cdk03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
105104165 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
105104165
NCBI-ProteinID:
XP_031297177
LinkDB
All DBs
Position
28:10318745..10378863
Genome browser
AA seq
1723 aa
AA seq
DB search
MLGSKNMPWRRLQGISFGMYSAEELKKLSVKSITNPRYLDSLGNPSANGLYDLALGPADS
KEVCSTCVQDFSNCSGHLGHIELPLTVYNPLLFDKLYLLLRGSCLNCHMLTCPRAVIHLL
LCQLRVLEVGALQAVYELERILYRFLEENANPTAFEIQEELEQYTTKIVQNNLLGSHGAH
VKNVCESRSKLIAVFWKTHMTAKRCPHCKTGRSVVRKEHNSKLTITYPAVVHPRADQRDA
EPPGIEEAHLGKRGYLTPSSAQEHLIALWKNEGFFLNYLFLGLEDVAVESRFNPSMFFLD
FLVVPPSRYRPVSRLGDQMFTNGQTVNLQAVMKDVVLIRKLLALMAQEQELPCEVAAPAT
DEEKDSSVAMDRSFLSLLPGQSLMDKLYNIWIRLQSHVNIVFDSEMDKLMMEKYPGIRQI
LEKKDGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTYPQPVTPWNVQEL
RQAVINGPSVHPGASMVINEDGSRTALSAADPTQREAVAKQLLTPATGAPKPQGTKIVCR
HVKNGDILLLNRQPTLHRPSIQAHRARILPEEKVLRLHYANCKAYNADFDGDEMNAHFPQ
SELGRAEAYVLACTDQQYLVPKDGQPLAGLIQDHMVSGANMTIRGCFFTREQYMELVYRG
LTDKVGRVKLFPPAILKPFPLWTGKQVVSTLLINVIPEDHVPLNLSGKAKISGKAWVKES
PRPVPGFNPDSMCESQVVIRDGELLCGVLDKAHYGSSAYGLVHCCYEIYGGETSGKVLTC
LARLFTAYLQLYRGFTLGVEDILVKPKADVRRHRIIEESTCCGPRAVRAALNLPETASCD
EVRGKWQDAHLGKDQRDFNMIDLKFKEEVNHYSNEINKASPAVCMPFGLHRQFPENNLQM
MVQSGAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAGGFVTGRFL
TGIKPPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQ
FLYGEDGLDIPKTQFLQPRQFPFLASNYEVIMKSKHLREVLSRADPQKALRHFRAIKKWQ
SKHSNSLLRKGAFLNYSQKIQAAVKALNLEGANQNGRSPETHQMLRMWSELDEQSRRKYQ
KKAAPCPDPSLSVWRPDIYFASVSETFEKKVDDYSHEWAAQAEKSYEKSELSLDRLRTLL
QLKWQRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVAS
ANIKTPMMSVPVLNTKKALKKVKSLKKQLTRVCLGEVLEKIDVQESFSMGEKQSKFRVYQ
LRFQFLPHVYYQQEKCLRPEDILHFMETRFFKILMESIRKKNNKASAFRSVNTRRATQRD
LDDAGELDRSRGEQDGGEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDYESEEEEDKE
DEDEEDVQEEGNVRREGGPQAPEQEEEEGASGPEEDSLPAARPAHPRRPPRSREPQGAEA
VERRVRAVRECHPFLQDYQYDTENSLWCQVTVQLPLMKVNFDMSSLVVSLAQDAVIYATK
GITRCLLNETTNSKNEKELVLNTEGINLQELFKHAEVLDLRRLYSNDIHAMASTYGIEAA
LRVIEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFGIRSNSSPLQQMTFETS
FQFLKQATMMGSHDELRSPSACLVVGKVVKGGTGLFELKQPLR
NT seq
5172 nt
NT seq
+upstream
nt +downstream
nt
atgttgggctcaaagaacatgccctggcggcggctgcagggcatttccttcggaatgtat
tcggccgaagagctcaagaaattaagcgttaagtccattacaaaccctcggtacctggac
agcctggggaacccatcggcgaatggcctgtatgatttagctctgggccctgcagattcc
aaagaggtgtgctccacctgcgtgcaggacttcagcaactgctccgggcacctgggccac
atcgagctcccgctcaccgtgtacaaccctctcctctttgacaaactctacctgctgctt
cgaggttcctgcttaaactgtcacatgctgacttgcccgcgggctgtgattcacctcctg
ctctgccagctgagagttctggaagtcggggcgctccaagcagtgtacgagctcgagcgg
attctgtacaggtttctggaggaaaatgctaatcctaccgccttcgaaattcaggaagag
ttagagcaatatacaaccaagattgtgcagaacaacctcctgggatcccacggcgcccac
gtgaaaaatgtctgtgagagcaggagcaagctcattgctgtcttctggaagacacacatg
actgctaagcgatgtccccactgcaaaaccgggcggtcagttgtccgaaaggagcacaac
agcaaactgacgatcacgtacccggccgtggtgcacccgagagccgaccagagggacgca
gagcccccgggaattgaggaagctcacttgggaaaacgaggatacctgacacccagcagc
gctcaagaacatctcatcgccctttggaagaatgaaggattctttctgaactacctcttt
ttgggactggaggatgttgccgtggaatccaggttcaaccccagtatgttctttctggat
ttcttggtggtgccaccgtcaaggtatcgccccgtcagtcgcctgggggaccagatgttt
accaatggccagacggtcaacttgcaggctgtcatgaaggatgtggttctgatccgaaag
cttctggcgttgatggcccaagaacaggagctgccgtgtgaggtggcagcacctgccaca
gatgaggaaaaagactcttcagttgccatggaccgatcatttttgagtctgcttccaggc
cagtccctcatggacaaactttacaacatttggattcgccttcagagccacgtcaatatt
gtgtttgatagcgaaatggacaaattaatgatggaaaagtaccctggcattagacagatc
ctggagaagaaagatggtttattccgaaagcacatgatgggaaagcgagtggactacgca
gcacgctcggtcatctgcccagacatgtacatcaacaccaacgaaattggaattcccatg
gtatttgccacaaaactgacctatcctcagccagttaccccgtggaacgttcaggagctg
aggcaagcagtcatcaacggccccagtgtgcacccgggagcctccatggtcatcaacgag
gatggcagccgcacagccctgagcgccgcggaccccacgcagcgggaagccgtagccaag
cagctcctgacacctgccaccggggcacctaagccccaggggacaaaaatcgtgtgccgg
cacgtgaagaatggggacatcctcctcctgaaccgacagcccaccctgcacaggccctcc
atccaggcgcaccgcgcccgcatcctgccggaagagaaggttctgcggctccactatgcc
aactgcaaggcctacaacgccgactttgatggggacgagatgaacgcccacttcccccag
agcgaactgggccgggccgaggcctatgtcctggcctgcacggatcagcagtacctcgtt
cccaaggatggccaaccattggcggggctgatccaagatcacatggtttcgggtgcaaac
atgaccattcgaggctgctttttcacccgggagcagtatatggagctggtgtaccgagga
ctcacagacaaagtcgggcgcgtgaagctctttcctcctgccatcctgaagcccttcccg
ctgtggacaggaaagcaggttgtctctacactgctcatcaacgtgatcccggaggaccac
gtccccctgaacttgtcgggaaaggcgaagatcagcggaaaggcctgggtgaaggagtct
cctcggcccgttcccggctttaacccggactccatgtgcgagtcccaggtggtcatcagg
gacggggagctgctctgcggggtgctggacaaggcacactacgggagctcggcctacggc
ctggtccactgctgctacgagatctacggcggggagaccagcggcaaggtcctcacctgc
ctggcccgcctcttcactgcctacctgcagctctacagaggcttcaccttgggcgtggaa
gacattttggtgaagccgaaggcggacgtcaggagacacaggatcattgaagagtccacc
tgctgtgggccccgggctgtcagggctgcattaaacctgccagaaactgcatcatgtgat
gaggtccgagggaaatggcaggatgcccatctgggaaaagaccagagggattttaacatg
attgatctgaagttcaaggaggaagtgaaccattacagcaacgaaattaacaaggctagt
cccgcagtgtgcatgcctttcggcctgcacagacagttcccagagaacaacttgcagatg
atggtgcagtccggagccaaaggttcaactgtgaacaccatgcagatctcatgcctgctg
ggccagattgagttggaaggtcggagaccccctctgatggcgtctggcaagtcgctgccc
tgcttcgagccctatgagttcaccccccgggccggcggcttcgtcaccggcagattcctt
acgggcatcaaacctcctgagttcttcttccactgcatggccgggcgagagggtctggtg
gacaccgcagtgaagaccagccgctccggttacctccagaggtgtatcatcaagcacctg
gaggggctggtcgtccagtatgacctgacggtccgtgacagcgacggcagcgtggtgcag
ttcctgtacggggaggacggcctggacatccccaagacgcagttcctgcagcccaggcag
ttccccttcctcgccagcaactatgaggtgataatgaaatcgaagcatctccgtgaagtt
ttatccagagcagatccccagaaagccctccgccacttcagagccatcaaaaaatggcaa
agcaagcattccaacagcctgctgcgaaagggcgccttcctgaattattcccagaaaatt
caggcagctgtgaaagctttgaacctcgagggtgcaaaccagaatggccgcagccccgag
actcaccagatgttgaggatgtggagcgagttagatgagcaaagccgaaggaaataccaa
aagaaggcagctccttgtcctgaccccagtctctccgtctggcgcccagacatctacttc
gcgtcagtgtcagaaacctttgaaaagaaggtggatgactacagtcacgagtgggcagct
caagcagagaagagttacgagaagtcagagctctctctcgacaggttgaggaccctcctg
cagctgaaatggcagcgctcgctgtgcgacccgggtgaggccgtgggcctgctggccgcc
cagagcattggggagccctccacacagatgaccctgaacaccttccactttgccggcaga
ggcgagatgaacgtcaccctgggcattccaaggttgagggagattctcatggtggccagc
gccaacatcaagacgcccatgatgagcgtgcctgtgctcaacaccaagaaagcactgaag
aaagtgaaaagcctgaagaagcagctcaccagggtgtgcctcggggaggtgttggagaag
attgatgtccaggagtctttctctatgggggagaaacagagcaagttccgggtgtaccag
ctgcgtttccagttcctgcctcacgtgtattaccagcaggagaagtgcctgagacccgag
gacatcctgcacttcatggaaacaagattctttaaaattttgatggaatccatcagaaag
aagaataataaggcgtcagctttcagaagcgtaaacacgcggagagctacccagcgggat
ctagacgacgctggggagttggacaggagtcggggagagcaggatgggggtgaggaggag
gagggacacattgtggacgccgaagctgaggagggagacgcggatgcctcggacgccaaa
cgcaaggagaagcaagaggaggaggtggattacgagagcgaggaggaagaggacaaggag
gacgaggacgaggaggacgtgcaggaggaagggaacgtccgcagggaaggcggtccccag
gccccggagcaggaggaggaggagggggcctcgggccctgaggaggactcgctgcctgct
gcccgcccggcgcatccccggaggcccccccgcagccgggagccccagggagccgaggcg
gtggagcggcgggtgcgggccgtgcgcgagtgccacccgttcctgcaggactaccagtac
gacaccgagaacagcctgtggtgccaggtgacagtgcagcttcctctcatgaaggtcaac
tttgacatgagctccctggtagtgtccttggctcaggacgccgtcatctatgcaaccaag
ggcatcacgagatgcctcctgaatgaaaccaccaacagcaagaacgagaaggagcttgtc
ttgaacacagagggcatcaacctgcaggagctgttcaagcacgccgaggtgctggatttg
cgccgcctctattccaacgacatccacgcgatggccagcacgtacggcatcgaggccgcg
ctgcgggtgatcgagaaggagatcaaggacgtgttcgccgtgtacggcatcgccgtcgac
ccccgccacctctccctggtcgctgactacatgtgcttcgagggtgtttacaagccactg
aatcgctttgggatccggtcgaactcgtcccctctgcagcagatgacgtttgaaaccagc
ttccagtttctgaagcaggccaccatgatgggatcccacgacgagctgaggtccccgtca
gcctgcctcgtggtcgggaaagtcgtcaagggcgggacgggcctgttcgagctcaagcag
cccctgagatag
DBGET
integrated database retrieval system
