Camelus dromedarius (Arabian camel): 105105240
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Entry
105105240 CDS
T04642
Symbol
ATG16L1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
cdk
Camelus dromedarius (Arabian camel)
Pathway
cdk04136
Autophagy - other
cdk04140
Autophagy - animal
cdk04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cdk00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
105105240 (ATG16L1)
04136 Autophagy - other
105105240 (ATG16L1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
105105240 (ATG16L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cdk04131
]
105105240 (ATG16L1)
03029 Mitochondrial biogenesis [BR:
cdk03029
]
105105240 (ATG16L1)
Membrane trafficking [BR:
cdk04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
105105240 (ATG16L1)
Others
Specific organelles associated proteins
Auto phagosome
105105240 (ATG16L1)
Mitochondrial biogenesis [BR:
cdk03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
105105240 (ATG16L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG16
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
WD40_RFWD3
eIF2A
NBCH_WD40
Beta-prop_HPS5
Beta-prop_DCAF12
Beta-prop_WDR19_1st
Beta-prop_NWD2_C
TolB_like
APEH_N
Motif
Other DBs
NCBI-GeneID:
105105240
NCBI-ProteinID:
XP_031308294
LinkDB
All DBs
Position
5:91254263..91291106
Genome browser
AA seq
623 aa
AA seq
DB search
MSSSLRAAVFPRWKRHISEELRRRDRLQRQAFEEIILQYNKLLEKSDLHSVLAHKLQAEK
HDLPNRHEISPGHDGAWNDSQLQEMAQLRIKHQEELTELHKKRGELAQLVIDLNNQMQQK
DKEMQMNEAKIAECLQTISDLETECLELRTKLQDLERANQTLKDEYDALQITFTALEEKL
RKTTEENQELVTRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPIEQDDDI
EVIVDETSDHTEETSPVRAISRAATKRLSQPAGGLLDSITNIFGLSESPLLGHHSSDAAR
RRSVSSFPVPQDNVDTHPGSSKEVRVPTTAMYVFDAHDGEVNAVQFSPGSRLLATGGMDR
RVKLWEVFGDKSEFKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTL
TGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMS
GHFDKKIRFWDIRSESIVREMELLGKITALDLNPERTELLSCSRDDLLKIIDLRINAVRQ
TFSAPGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSVLSGKVEKVLSKHHSSSINAVA
WSPSGSHVVSVDKGSKAVLWSEY
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgagcctccgcgccgccgtcttccctcgctggaagcgacacatctcggaggag
ctgaggcgtcgggaccggctgcagaggcaggcattcgaagagatcatcctgcagtataac
aagttgctggaaaagtcggatcttcattcagtgctggcccataagctacaagctgaaaag
catgacttaccaaacaggcacgagataagtcctggacatgatggcgcgtggaatgatagt
cagctgcaagaaatggcccagctgaggattaaacaccaagaagaactgaccgaattacac
aagaaacgtggggagttggctcagttggtgattgacctgaataaccaaatgcagcagaag
gacaaagagatgcagatgaatgaagccaaaattgcagaatgtttgcagaccatctctgac
ctggagactgagtgcctagaactacgcactaagcttcaggaccttgaaagagccaaccag
accctgaaggatgagtacgatgccctgcagatcaccttcactgccctggaggagaaactg
cggaaaactactgaagagaaccaggagctggtcaccagatggatggctgagaaagcccag
gaagccaaccgcctaaatgcagagaatgaaaaggattcgaggcggcggcaagcccggctg
cagaaagagcttgcagaagcagcaaaggaacctctaccaattgagcaggacgatgacatt
gaagtcattgtggacgagacctctgatcacaccgaggagacctctccagtgcgagccatc
agcagagcggccactaagcgactctcgcagcctgctggaggccttctggattctatcact
aatatctttggtctgtccgagtctccccttttgggacatcactcttctgatgctgccagg
aggcgctctgtctcttcctttccagttccccaggataacgtggatactcatcctggttct
agtaaagaagtgagggtgccaacgactgcaatgtatgtctttgacgctcacgatggggag
gtcaacgctgtgcagttcagtccgggttcccggcttctggccacaggaggcatggatcgg
agggtgaagctttgggaagtgtttggagacaaatctgagttcaagggttccctctccggc
agtaatgcaggaattacaagtattgagtttgatagtgctggatcttacctcttagcggca
tcaaatgactttgcaagccgaatctggactgtggacgactatcggttacggcacacactc
acaggacacagtggcaaagtgctgtctgccaagttcctgctggacaatgcgcgtattgtt
tctggaagtcatgaccggaccctcaaactctgggatctacgcagcaaagtctgcataaag
acggtatttgcgggatccagctgcaatgatattgtctgcacagagcagtgtgtaatgagt
ggacattttgacaagaaaattcgcttctgggacatccgatcagagagtatcgtccgagag
atggaactcttgggaaagattactgccctggacttaaacccagagagaaccgaactcctc
agctgctcccgtgatgacctgctaaaaattattgacttacgaataaacgcagtcagacag
acattcagtgctcctggcttcaagtgcggttctgattggacgagagtcgtgttcagccct
gacggcagttacgtggcagccggctcggccgagggctctctctacatctggagcgtgctc
tctgggaaggtggagaaggtcctttcaaagcatcacagctcgtcaatcaacgcggtggcc
tggtccccctccggctcccacgtcgtcagtgtggacaaaggaagcaaagctgtgctgtgg
tcagaatactga
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