Clostridioides difficile R20291: CDR20291_0003
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Entry
CDR20291_0003 CDS
T00998
Symbol
serS1
Name
(GenBank) seryl-tRNA synthetase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
cdl
Clostridioides difficile R20291
Pathway
cdl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cdl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CDR20291_0003 (serS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cdl01007
]
CDR20291_0003 (serS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cdl03016
]
CDR20291_0003 (serS1)
Enzymes [BR:
cdl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
CDR20291_0003 (serS1)
Amino acid related enzymes [BR:
cdl01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
CDR20291_0003 (serS1)
Transfer RNA biogenesis [BR:
cdl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CDR20291_0003 (serS1)
Prokaryotic type
CDR20291_0003 (serS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Laminin_I
NPV_P10
GAS
COG3_N
Phage_GP20
Motif
Other DBs
NCBI-ProteinID:
CBE01468
UniProt:
A0A9R0CD05
LinkDB
All DBs
Position
17713..18984
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AA seq
423 aa
AA seq
DB search
MLDIKRIRENLDDIKKAMERRGEREFDLDAVVELDNKRREILQEVEVMKNELNVNSKKIP
QLIKEGKDVTEEKTRLKELSDKIKGIDEKVKEVEAKMEYTLMRIPNVPHPEVPQGETDED
NVQIRTWGEPTKFDFEYKAHWDIGTGLGILDFERAGKITGSRFTLYRGLGARLERSLMNF
FLNTHTAKHGYTEVLPPFMANRNSFIGTGQLPKFEEDMFKIEGLEYFLIPTAEVPVTNIH
ANEILDVAELPIKYCAYTPCFRSEAGSAGRDTRGLVRQHQFNKVELVKFVKPEDSYNELE
SLTHDAETMLQMLGLPYRVVKICTGDLGFTAAFKYDLEVWMPSYNRYVEISSCSNFEDFQ
ARRAGIRFKRDKKSKAEYVHTLNGSGLAIGRCLAAILENYQQADGSVVVPEELRPYMGVD
VIK
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgttagatattaaaagaataagagaaaatctagatgatatcaaaaaagctatggaaaga
agaggtgaaagagaatttgaccttgatgctgtagtggaactagataataaaagaagagaa
atacttcaagaagttgaagttatgaaaaatgagttaaatgtaaattctaaaaaaatacct
caattaataaaagaaggaaaagatgtaacagaagaaaagacaagattgaaagagttatca
gataagataaaaggtattgatgagaaagtaaaagaagtagaagcaaaaatggaatataca
ttaatgagaataccaaatgttcctcatccagaggtaccacaaggtgaaacagatgaagac
aatgttcaaataagaacttggggagaacctactaaatttgattttgagtataaagcgcat
tgggatatagggacaggtctaggtattttagattttgaaagagcagggaaaataactggg
tcaaggtttactttatataggggattaggagctagattagaaagatctttaatgaatttc
tttttaaatactcatacagctaagcatggctatacagaagtcttacctccatttatggcc
aatagaaatagttttatagggactggtcaacttcctaaatttgaagaagatatgtttaaa
atagaaggattagagtatttcttaataccaacagctgaagttcctgttactaatatacat
gctaatgaaatattagatgttgcagagcttccaattaaatactgtgcatatactccttgt
tttagatctgaagcaggttcagcaggaagagatacaagaggtttagttagacaacatcaa
tttaataaagttgaattagttaaatttgttaaaccagaagattcttataatgaattagaa
tcattaactcatgatgctgaaactatgttacaaatgttaggtcttccatatagagttgta
aaaatatgtacaggagatttgggatttacagctgcatttaaatatgatttagaagtttgg
atgccaagttacaatagatatgtagaaatatcttcttgttcaaattttgaagatttccaa
gcaagaagagcaggaataagatttaaaagagataaaaaatcaaaagcagaatatgttcat
acattaaatggttctggattagcgataggaagatgtttggctgctatattagaaaattat
cagcaggcagatggttctgtagtagttccagaagaattaagaccttatatgggtgttgat
gttataaaataa
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