Clostridioides difficile R20291: CDR20291_0195
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Entry
CDR20291_0195 CDS
T00998
Symbol
groEL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cdl
Clostridioides difficile R20291
Pathway
cdl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cdl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CDR20291_0195 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdl03019
]
CDR20291_0195 (groEL)
03110 Chaperones and folding catalysts [BR:
cdl03110
]
CDR20291_0195 (groEL)
03029 Mitochondrial biogenesis [BR:
cdl03029
]
CDR20291_0195 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cdl04147
]
CDR20291_0195 (groEL)
Enzymes [BR:
cdl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
CDR20291_0195 (groEL)
Messenger RNA biogenesis [BR:
cdl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CDR20291_0195 (groEL)
Chaperones and folding catalysts [BR:
cdl03110
]
Heat shock proteins
HSP60 / Chaperonin
CDR20291_0195 (groEL)
Mitochondrial biogenesis [BR:
cdl03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
CDR20291_0195 (groEL)
Exosome [BR:
cdl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CDR20291_0195 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
CDR20291_0195 (groEL)
Exosomal proteins of breast cancer cells
CDR20291_0195 (groEL)
Exosomal proteins of colorectal cancer cells
CDR20291_0195 (groEL)
Exosomal proteins of bladder cancer cells
CDR20291_0195 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
HAD_2
Motif
Other DBs
NCBI-ProteinID:
CBE01797
UniProt:
A0A9R0CD68
LinkDB
All DBs
Position
247856..249484
Genome browser
AA seq
542 aa
AA seq
DB search
MAKEIKFSEETRRALEAGVNKLADTVKVTLGPKGRNVILDKKFGSPLITNDGVTIAKEIE
LEDRFENMGAQLVKEVATKTNDVAGDGTTTATVLAQAIIREGLKNVTAGANPILLRKGIQ
KAVIVAVEELKNQSRIVETQEAISQVASISAGDEEVGKLIAEAMEIVGKDGVITVEESQT
MNTELDAVEGMQFDRGFVSAYMVTDVDKMEAVLNDPYILITDKKISNIQELLPVLEQIVQ
QGKKLLIIAEDVEGEALSTLVVNKLRGTFDVVAVKAPGFGDRRKEMLQDIAILTGAQVIS
EELGYDLKEADLSMLGRASSVKVTKESTTIVDGSGDKKAIEDRVTQIKHQVEQTTSDFDR
EKLMERLAKLAGGVAVVKVGAATEVELKERKLRIEDALNATRAAVEEGIVAGGGTAFVSV
IPAIGTLIESLEGEVKLGAQIVKKALEEPLRQIAINAGLEGAVIVQNVVNSEAETGFDAL
NEKYVNMIEAGIVDPTKVSRSALQNAASIASTFLTTEAAVADLPEKEDAGMPGMGGGMPG
MM
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagaaattaaattttcagaggaaacaagaagagctttagaagctggtgtaaat
aaattagcagatacagtaaaagtaacattaggacctaaaggaagaaatgttatattagat
aaaaaatttggttctccacttataactaatgatggagtaactatagcaaaagagatagaa
ctagaagatagatttgaaaatatgggtgctcaattagttaaagaagtagcaactaaaact
aatgatgtagctggagatggtactacaactgctacagttttagcacaagctataataaga
gaaggtttaaagaatgtaacagcaggggctaacccaatacttttaagaaaaggaatacaa
aaagcagtaatagtagcggtagaagaattaaaaaatcaatcaagaatagtagaaacacaa
gaggctatatctcaagttgcttctatatctgctggtgatgaagaagttggaaaattaata
gcagaagctatggaaatagtaggtaaagatggagttataactgttgaagagtctcaaact
atgaatactgaattagatgctgttgaaggtatgcagtttgatagaggatttgtttctgca
tatatggttacagatgtagataaaatggaagcagttttaaatgacccatatatattaatt
actgataagaaaatatctaacatacaagaattattaccagttcttgaacaaatagttcaa
caaggtaaaaagttattgataatagctgaagatgtagaaggtgaagcattatctacatta
gtagtaaataaattaagaggaacatttgatgtagtagcagttaaagctccaggctttgga
gatagaagaaaagaaatgcttcaagatatagcaatacttacaggtgctcaagtaatatca
gaagaattaggttatgatttaaaagaagctgatttatctatgctaggtagagcttcatct
gttaaggtaactaaagaaagtactacaatagtagatggttctggagataaaaaagctata
gaagatagagtaactcaaattaaacatcaagtagagcaaactacttcagattttgataga
gagaaattaatggaaagattagctaaacttgctggaggagtagctgttgtaaaagttgga
gctgctacagaagtagagttaaaagaaagaaaattaagaatagaagatgctcttaatgca
actagagcagctgtagaagaaggaatagtagctggtggaggaactgcttttgttagtgtt
ataccagcaataggaacactaattgagagtttagaaggagaagttaaactaggtgctcaa
atagttaaaaaagcgttagaagagccattaagacaaatagctataaatgctggtcttgaa
ggtgctgtaattgtgcaaaatgttgttaattctgaagcagaaactggatttgacgcattg
aatgaaaaatatgtaaatatgatagaagctggtatagttgacccaactaaagttagtaga
agtgctttacaaaatgctgcatcaatagcaagtactttcttaactactgaagctgctgtt
gctgaccttcctgaaaaagaagatgcaggaatgccaggaatgggtggcggaatgcctggt
atgatgtaa
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