Clostridioides difficile R20291: CDR20291_0225
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Entry
CDR20291_0225 CDS
T00998
Name
(GenBank) dtdp-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
cdl
Clostridioides difficile R20291
Pathway
cdl00521
Streptomycin biosynthesis
cdl00523
Polyketide sugar unit biosynthesis
cdl00541
Biosynthesis of various nucleotide sugars
cdl01100
Metabolic pathways
cdl01110
Biosynthesis of secondary metabolites
cdl01250
Biosynthesis of nucleotide sugars
Module
cdl_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
cdl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CDR20291_0225
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CDR20291_0225
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CDR20291_0225
Enzymes [BR:
cdl01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
CDR20291_0225
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GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
CBE01848
UniProt:
A0A9R0CD78
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All DBs
Position
286058..286615
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AA seq
185 aa
AA seq
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MGKINVIKTKIEGLYIVEPNVFCDERGYFMESYNKKDFIEQGLDMCFIQDNESSSRKGVL
RGMHFQVRYPQGKLVRVTEGEVFDVAVDLRKDSQTFGKWEGVILSDKNKKQFYIPEGFAH
GFLVLSEKAVFNYKCTNYYYPEFEHGFIWNDKQISIEWPLKGIEEIFLSEKDKKQKSFKD
ICIRR
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaatcaatgttataaagactaaaatagaaggattatatatagtcgaaccaaat
gtattttgtgatgaaagaggatattttatggaaagctataataaaaaggattttatagag
cagggtcttgatatgtgttttattcaagataatgagtctagctcaagaaaaggtgtttta
agaggaatgcattttcaggttagatatcctcaaggaaaattagtcagagttacagaggga
gaagttttcgatgttgcagttgatttaagaaaagattcacagacatttgggaaatgggaa
ggtgtaatattgtctgataagaataaaaaacaattttatattccagaagggtttgcacat
ggatttttagttttatcagaaaaagcagtatttaattacaaatgtacaaactattattat
ccagaatttgagcatgggtttatatggaatgacaagcaaatatctattgagtggccttta
aaaggaattgaagaaatatttttatcagaaaaggacaaaaaacaaaaaagttttaaagat
atttgtataagacgttaa
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