Clostridioides difficile R20291: CDR20291_0333
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Entry
CDR20291_0333 CDS
T00998
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cdl
Clostridioides difficile R20291
Pathway
cdl03420
Nucleotide excision repair
cdl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cdl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CDR20291_0333 (pcrA)
03430 Mismatch repair
CDR20291_0333 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdl03400
]
CDR20291_0333 (pcrA)
Enzymes [BR:
cdl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CDR20291_0333 (pcrA)
DNA repair and recombination proteins [BR:
cdl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CDR20291_0333 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
CDR20291_0333 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
Viral_helicase1
DUF3553
AAA_11
AAA_22
DEAD
ResIII
CarD_TRCF_RID
Astro_capsid_p
FliD_N
Motif
Other DBs
NCBI-ProteinID:
CBE02039
UniProt:
A0A9R0BHY9
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All DBs
Position
395559..397847
Genome browser
AA seq
762 aa
AA seq
DB search
MAVNRRRNMNLDTLNPAQREAVEKTEGPVLILAGAGSGKTKVLTTRIAYLIEDKGVQAPN
ILAITFTNKAANEMRERVEQNIGPETKDMWISTFHSCCVRILRKDINKIGYNRSFVIYDS
ADQVTLVKDCLKELNLSDKVFEPKAVISAISGAKDKLYTPKQFKDINMADNRMVKIADIY
ALYQDRLKRNSALDFDDLILKTVELFKANDEVLAYYRSRFRYIMVDEYQDTSKAQYELIK
LLAREHQNICVVGDDDQSIYGWRGADIRNILEFEKDYDNVHVVKLEQNYRSTQVILDAAN
KVISNNIERKRKKLWSEKKEGELIKIQLTGSEIEEADFIADSIAQIARKENRPYKDFAVL
YRANAQARPVEDALNRSQIPYNIYGGTKFYERKEIKDLLAYLRVIQNPQDDISIKRIINV
PRRGIGLRTIEKIEDRANLKQESIYSVLIDIETNSDISTKARASISGFVDIIGTLRTIKE
VYPVSKLIEKVLDTTGYMDELVEIRNKNEKDLTGKGEEAQDRIDNLREFISIALEFESSN
DDTYENKDLETFLTSIALTSESNDEEDNDRVSLMTIHTSKGLEFPVVFLTGMEEGLFPIS
RAIKSMSDSQIEEERRLCYVGITRAKEELYMSLTEKRTLYGKTNVAIASRFMEELPEECI
ERLYKVKKELSYSKASYNMLDKYTKKYMSTISKSKVADKVNATIKDSNKETNPDDIKLGS
KVHHPKFGVGTVVSIIGTDVTIAFDQQGIKKINKEYTTLNIL
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atggctgttaacaggaggagaaatatgaatttagatacattaaatcctgctcaaagagaa
gcagtagaaaagactgaaggtccagtacttatactggctggtgctggttcaggtaaaact
aaggtattaacaacaagaatagcatatcttatagaagataaaggtgtacaagcaccaaat
atattagctataacatttacaaacaaagctgcaaatgaaatgagagagagagttgaacaa
aatataggtcctgaaactaaggatatgtggataagtacattccattcttgctgtgttcgt
atactaagaaaagatataaataagattggttacaatagaagttttgtaatttatgattca
gcagaccaagttacattggttaaagactgtctaaaagaattaaatttaagtgataaagtg
tttgaaccaaaagcagttataagtgcaatttcaggagcaaaagacaaactttatactcca
aagcagtttaaagatatcaacatggcagataatagaatggttaagattgcagatatttat
gcgttatatcaagaccgtttaaaaagaaatagtgcacttgactttgatgatttaatactt
aaaactgtagaacttttcaaggctaatgatgaagtattagcatattacagaagtagattt
agatacataatggtagatgagtaccaagatacaagtaaagctcaatatgaattgataaaa
ttattagcaagagaacatcaaaatatttgtgttgttggagatgatgaccaaagtatttat
ggatggagaggcgcagatataagaaacatacttgaatttgagaaagattatgacaatgta
catgttgtaaagttagaacaaaattataggtctacacaagtgatattagatgcagctaat
aaagttatatctaataatatagaaagaaaaagaaaaaagctttggagtgaaaaaaaagaa
ggagaacttataaagatacaattaactggtagcgaaatagaagaggctgatttcattgct
gattcaattgcacaaatagctagaaaagaaaatagaccttataaggattttgcagtactt
tatagagcaaatgcacaggcaagacctgtagaggacgctttaaatagaagtcaaattcca
tacaatatatatggtggtacaaaattctacgagagaaaagaaataaaggatttgttggcg
tatttaagagttattcaaaatccacaagatgatatatctataaaaaggattataaatgtt
cctagaagaggtatagggcttagaactatagaaaaaattgaagatagagctaacttaaaa
caggaaagtatatactcagtattaattgatatagaaacaaattcagatatatctactaag
gcaagggcaagtataagtggatttgttgatattatagggactcttagaactataaaagaa
gtttatcctgttagcaaacttatagaaaaagtcttggatactacaggatatatggacgag
cttgtagagataagaaataaaaatgaaaaagatttaacaggcaaaggtgaagaagctcaa
gacagaattgataatttgagagaatttatttctatagctttggagtttgaaagtagtaat
gatgatacttatgaaaataaagacttagagacattcctaacaagtatagcacttacatct
gaatcaaatgatgaagaagacaatgatagggtttcgcttatgacaattcatacatccaaa
ggtttagagttccctgttgtgtttttaacaggtatggaagaagggttatttcctatatca
agagctataaaatctatgagtgattcacaaatagaagaagagagaagactttgttatgtt
ggtataactagagctaaagaagagctatatatgtcattgacagagaagagaacattatat
ggtaaaacaaatgttgcaatagcttcaagatttatggaagaactgccagaagaatgtata
gaaagattgtacaaagtaaaaaaagaactaagctattctaaagcaagttataatatgtta
gataaatatactaaaaagtatatgagtactataagcaaatctaaagttgcagataaagtt
aatgctacaataaaagattctaataaagaaactaatccagatgatataaaacttggttct
aaggtacatcatcctaaatttggggttgggacagtggtttctataattggtacagatgtt
actatagcttttgaccaacagggaattaaaaaaataaataaagaatatacaacactaaat
attttataa
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