Clostridioides difficile R20291: CDR20291_0396
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Entry
CDR20291_0396 CDS
T00998
Name
(GenBank) conserved hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cdl
Clostridioides difficile R20291
Pathway
cdl03420
Nucleotide excision repair
cdl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cdl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CDR20291_0396
03430 Mismatch repair
CDR20291_0396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdl03400
]
CDR20291_0396
Enzymes [BR:
cdl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CDR20291_0396
DNA repair and recombination proteins [BR:
cdl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CDR20291_0396
MMR (mismatch excision repair)
Other MMR factors
CDR20291_0396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
UvrD_C_2
Viral_helicase1
AAA_19
PhoH
SLFN-g3_helicase
DEAD
ADDB_N
HdcB
ResIII
NACHT
Motif
Other DBs
NCBI-ProteinID:
CBE02152
UniProt:
A0A9R0CDD4
LinkDB
All DBs
Position
475180..477294
Genome browser
AA seq
704 aa
AA seq
DB search
MSENKQVVNCDIIASNSKHNMCEHDVELLTFFPDEIAHLIEINNKLDNAFKKAENLVDKL
DKDYMDAKMYMVKNRGEIDPHEMFQNEQGLKQIDNYGAFMVKVRDKINKIKDSPYFARID
FRLKDMDDESKYYIGRFAFDYEDELIILDWRSPIASMFYDYEIGKAGYDAPIGWVDGEIT
RKRQFKIKNGKLEYALESSINIQDDILQKELSHTSDEKMKSIISTIQKEQNQIIRNDKAD
TLIIQGVAGSGKTSIALHRIAFLLYRFKDKISANNVIILSPNKVFGDYISNVLPELGEEP
LCELSFENIAEVQLDRVINFESEKDPLEINDAKWSERVRFKSTLDFVKLIDDYIKQMPNK
IFIPKDYTFGSFTAKSDWIQSRFEAYNRYPVKKRLEKVAEDIHYKFESDNIMEEDLPKVK
SILKSLNGMLTIKNTLTLYKDFFKQMNISNMFVMAEKKTLEWSDVYPFIYIHAAYEGIQE
DKIIRHIVIDEMQDYTPIQYAVINLLFKCKKTILGDFGQLVNPNHTHTLDDMKQLYNDGE
LVMLNKSYRSTFEIINFAKKIQDISSLEPIERHGEEPALLKCNNEQDEINKIKIEIEEFK
KSDNATLGIILKTDNDAKAVYDALREEYSVHLISSESSSFTKGVSITSIKMSKGLEFDEV
IVPSVNNKTYYSDYDRSLLYIACTRAMHKLKLTYVGTLTQLISM
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaataaacaagtagtaaattgcgatattattgcatccaattctaaacataat
atgtgtgaacatgatgtagagttattaactttttttccagatgagattgcacatctaata
gagataaataacaagctagacaatgcttttaagaaagctgaaaatcttgttgacaagctt
gataaggattatatggacgctaaaatgtatatggtaaaaaatcgtggtgaaatagaccca
catgaaatgtttcaaaatgaacaaggactaaaacaaatagataactatggggcttttatg
gtaaaagttcgagataagattaataaaatcaaagattctccatactttgctagaatagat
tttaggctgaaagatatggatgatgaatctaagtattatattggtagatttgcatttgat
tatgaagatgagcttataatacttgactggcgttctccaattgccagtatgttttatgat
tatgaaatcggaaaagctggatatgatgctccaataggatgggtggatggagaaataaca
agaaaacgacaatttaaaattaaaaatggaaaattggaatatgcactagaaagttccatt
aatatacaagatgatattcttcaaaaagaacttagtcacacttcagatgaaaaaatgaag
tcaatcatttcaacaatacaaaaggaacaaaatcaaattattagaaatgataaagctgat
acactgattattcaaggggtagctggttctgggaaaacatctatagcattacacagaatt
gcttttcttctttatcgatttaaagataaaatatcagcaaataatgtaattatcctatca
cctaataaagtctttggagactatatttccaatgtccttcctgagcttggagaagaacca
ttatgtgaattaagttttgaaaatatagcagaggtacaattagatagagttattaatttt
gaaagtgagaaagacccattagaaataaatgatgctaaatggtctgaaagagtgcgtttt
aaatctacacttgattttgtaaaacttattgatgattatataaaacaaatgccaaataag
atttttattccaaaagactacacttttggaagttttacagctaaaagtgactggatacag
agtagatttgaggcatataacagatatccagttaagaagagattagaaaaggtagctgaa
gacattcattataaatttgaatcagataatattatggaagaagatttaccaaaggtaaaa
agtatacttaaaagtttgaatggaatgttgacaataaaaaatactcttacactatataag
gatttctttaaacaaatgaatatatcaaacatgtttgtgatggcagaaaagaaaacactt
gaatggtcagatgtatacccatttatatatattcatgctgcatatgaaggtatacaagaa
gataagattataaggcatattgttattgatgaaatgcaggactatacacctattcaatat
gctgtaataaacttactttttaagtgtaaaaagactattcttggagattttggacaattg
gttaatcctaatcatactcatacattagatgatatgaaacagctatataatgatggggaa
ctagttatgttgaacaagagttaccgttctacttttgagattattaatttcgccaaaaag
attcaagatatatcttcattagagcctattgaacgacatggtgaagaaccggctttatta
aaatgtaataacgagcaagatgaaataaataagataaaaatagaaattgaagaatttaaa
aagagtgataatgcgactcttggtattatattaaagacagataatgacgctaaagctgta
tatgatgcgttaagagaagaatatagtgttcacttaatatcttctgaaagttctagcttt
acaaaaggagtatccataacttctattaaaatgtcaaaaggtttagagtttgatgaagtt
attgtaccttcagtaaataataaaacatattatagtgattatgaccgcagtttgttatat
attgcttgtacacgagctatgcacaaacttaagttaacatatgttggtacattaactcaa
cttataagcatgtag
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