Clostridioides difficile R20291: CDR20291_0553
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Entry
CDR20291_0553 CDS
T00998
Name
(GenBank) putative drug/sodium antiporter
KO
K26937
MATE family, multidrug efflux pump
Organism
cdl
Clostridioides difficile R20291
Brite
KEGG Orthology (KO) [BR:
cdl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cdl02000
]
CDR20291_0553
Transporters [BR:
cdl02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
CDR20291_0553
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Gene cluster
GFIT
Motif
Pfam:
MatE
Polysacc_synt
UL78
Motif
Other DBs
NCBI-ProteinID:
CBE02429
UniProt:
A0A9R0BIF8
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Position
complement(673200..674564)
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AA seq
454 aa
AA seq
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MKESNKKIELLGSAPISKALLSMGLPTMIGMMITALYNLVDAYFVGGLGTSQMGAISVAF
PLGQLVVGLGLLFGNGAASYIARLLGHGDNEKAGKVVSTSIYSSIIVGTLVIIVIMIFLN
PILKLLGATKSIMPYAISYASIYVVSSIFNIFNVTMTNIVTSEGAAKTTMCAMLLGALLN
MILDPIFIYTFGLGVRGASIATAISQIASTLVYVGYILSKKSIFSFRINECCFSKEIFSE
ILKIGIPTLIFQLLTSLAITLTNMEATKYGDSVIAGMGAVTRITSLGSLVVFGFIKGFQP
IAGYNFGSKNYDKLHIAIKTSILWTTIFCVVLGLILVLFPKSIISQFTSGDILLIENGSK
ALRANGFSFMLFGFYTVYSTLFLALGKAKEGGFLGMCRQGVCFIPIILIIPVFYGLNGIL
YAQPIADLMAAIIAGFMSIRLHKELNLLKINGMH
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaagtaacaaaaaaattgaattattagggtctgccccaatctcaaaagcattg
ttatctatgggattacctaccatgataggtatgatgataactgcattatacaatttggtt
gatgcatactttgtgggtggacttggaacaagtcaaatgggagctatatccgttgcattt
ccattaggtcagcttgttgtgggattaggattattgtttggaaatggagctgcttcatat
attgccagacttttaggccatggtgataatgaaaaagcaggaaaagtggtaagtacatct
atttacagtagtattatagtgggtacattagttattattgtgattatgatttttctcaat
ccaattttaaaattgttaggagctacaaaaagtattatgccttatgcaatatcttatgct
agcatttatgtcgtgtcatctatttttaatatattcaatgtcactatgactaatattgtc
acaagtgaaggagctgctaaaacaactatgtgtgctatgttattaggtgctttgcttaat
atgattttagacccgatattcatttatacttttggtctgggggtaaggggtgcttctatt
gcaacagctatctcacagattgcttcaacacttgtttatgtaggatatattttaagcaag
aaaagtatatttagttttagaattaacgaatgctgtttttcaaaagaaattttttcagaa
atcctaaaaattggcatacctacattaatatttcaattattgactagtcttgccattaca
ttaactaatatggaggctacaaagtatggtgattctgtgatagctggaatgggtgctgta
acacgaataacatctttaggtagtcttgttgtatttggttttataaaaggtttccaacca
attgctggttataattttggttcgaagaactacgataaattacatatagcaataaaaact
tccatattatggactacaatattttgtgtagtgcttggtcttatattggtgcttttccca
aaatctataatttcacaatttacaagtggtgacattctattaatagaaaatggtagtaaa
gctcttagggcaaatgggttttcatttatgctatttggattctatacagtgtattctaca
ttattcctagcactaggaaaagcaaaggaaggtggatttttaggtatgtgtagacaaggc
gtctgttttatccctataattttgattattcctgtattctatgggttaaatggtatctta
tatgcacaaccaatagctgatttgatggctgctataattgctggttttatgtctataagg
ttacataaggaacttaatcttttaaaaataaacggtatgcattag
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