Clostridioides difficile R20291: CDR20291_0677
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Entry
CDR20291_0677 CDS
T00998
Name
(GenBank) putative ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cdl
Clostridioides difficile R20291
Pathway
cdl03420
Nucleotide excision repair
cdl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cdl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CDR20291_0677
03430 Mismatch repair
CDR20291_0677
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdl03400
]
CDR20291_0677
Enzymes [BR:
cdl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CDR20291_0677
DNA repair and recombination proteins [BR:
cdl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CDR20291_0677
MMR (mismatch excision repair)
Other MMR factors
CDR20291_0677
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
DEAD
AAA_11
AAA_12
MNE1
PcrA_UvrD_tudor
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
CBE02644
UniProt:
A0A9R0BIP6
LinkDB
All DBs
Position
838605..840671
Genome browser
AA seq
688 aa
AA seq
DB search
MVELIITTNIDIRKLNENQLEAVEHIDGPCMILAGPGSGKTRVITYRIANMVVNKNIAPT
RILAISFTKASSIEMKNRALNLSDDIRLNKVTYGTFHSVFFKILRYFERYNLDSIFDEKS
KRMTIKAILKSLNIENADDDENIGQVINEISYVKNELMDKNEFNSEVLTKDEFLKVYNLY
EEQKSKVNKIDFDDMLIRTYYLLLNNKSALEMVRNVYKYILIDEFQDINKVQFEVLKLIC
SPLNNIFAVGDEDQSIYGFRGARPDFLLEFEQYFNNTKKIILDINYRSKSEIVYTANRLI
DKNKNRYEKVIKCSQGDGGSVTYISPHDSEEEALYIAKEIIDEIQKDYVEYSDFAVIYRT
NIQSRALVDVFMDMRIPFVVKDSVITIYDHWASQDILAYLRIGINPKSNKDWLRIINKPF
RYISKDSINMVKDEKDFITALINKCNLHPKQVKTINDLEIDLSYLNTLNPKNAISYIRTS
LDYDRYVLDYCSNRKIKTNGLVEILNELESSATNFNTVTEFLEHIDRVKTELTENNKNKQ
TEGVIFTTMHSAKGLEFRNVYIIGVNEGTIPHEKSYDICKEEKKEEQLEEERRLMYVAIT
RAEEKLCISSTLNKYGKKVDKSLFINDIKSPTKKEIDSIGVGDKVYHKKFHEGEIIKKDG
IMFTIKFKDRERILDLKTCLLKNIIYTI
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
gtggtggagctaataatcacaacaaacatagatataagaaagttaaatgaaaatcaatta
gaagcagttgaacatatagatgggccttgcatgatacttgcagggcctggttcaggtaag
accagagtaattacatatagaatagccaatatggttgtaaacaaaaatatagcaccaaca
agaatcttggcaataagttttaccaaggcatcttcaatagaaatgaaaaatagagctttg
aatttaagtgatgatataagacttaataaggtaacctatggtacttttcactctgtattt
tttaaaattctaagatactttgaaagatacaatttagacagtatatttgatgaaaagtca
aagcgaatgacaatcaaggcaatcctaaaaagtttaaatatagagaatgctgatgatgat
gagaatataggacaagttataaatgaaatctcctatgtaaaaaatgaacttatggataaa
aatgaatttaattcagaagtattaacaaaagatgagtttttaaaagtatacaacttatac
gaagaacaaaaatctaaagttaacaaaatagattttgatgatatgcttataagaacttat
tatttacttttgaacaataagtctgcactagaaatggttagaaatgtgtataaatatata
ttgatagatgaatttcaagatataaataaagtacagtttgaagttttaaagttaatttgt
agcccattaaacaatatatttgcagttggagatgaagaccaaagtatatatggatttaga
ggtgctagaccagattttttgcttgaatttgaacaatactttaataatactaaaaaaata
atattagatataaattataggtctaaaagtgagatagtgtatactgcaaatagacttatc
gacaaaaataaaaatagatatgaaaaagtcattaagtgtagtcagggggatggaggaagt
gttacctacatttctccacatgattcagaggaagaagccttatatattgccaaggaaata
attgacgaaatacaaaaagattatgtagagtattcagattttgcagtaatttatagaaca
aatatacagtcaagagcattagtagatgtatttatggatatgaggattccatttgtagta
aaagactcagtaattacaatatatgaccattgggcaagtcaagatatactagcttattta
agaataggtattaatccaaaatcaaataaagattggttgagaattataaacaagcctttt
agatatatatccaaagacagtataaatatggttaaggatgaaaaagactttataacagca
ttaataaataagtgtaatcttcatcctaaacaagttaaaacaataaatgatttggaaata
gatttaagttatttaaatactttaaatcctaaaaatgcaatatcttatattagaactagt
cttgattatgatagatacgttttagattattgtagcaacagaaagataaaaactaatgga
cttgtagagatattaaatgaacttgagagttcagcaactaattttaatactgttacagag
tttttagagcatattgatagagtaaagactgagttaacggaaaataacaagaataagcag
actgagggtgtcatatttacaactatgcatagtgcaaaaggattagaatttagaaatgtt
tatattataggtgtaaatgaaggaacaatacctcatgaaaaatcatatgatatttgtaag
gaagagaaaaaagaagaacaattagaagaagaaagaagacttatgtatgttgctattaca
agagctgaagaaaagttatgtataagctctactttaaataagtatggtaagaaagttgat
aaatcattatttattaatgatataaaatctccaacgaaaaaagaaattgacagtattggt
gtaggggataaggtataccataaaaaatttcatgaaggagaaataattaaaaaagatgga
attatgtttacaataaagtttaaagatagagagcgaatcttggatttgaaaacttgttta
ttgaagaatataatttatactatttaa
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