Clostridioides difficile R20291: CDR20291_0851
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Entry
CDR20291_0851 CDS
T00998
Name
(GenBank) putative radical SAM protein
Organism
cdl
Clostridioides difficile R20291
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM_N
DUF3362
Radical_SAM
B12-binding
Metallophos
FAM110_N
Motif
Other DBs
NCBI-ProteinID:
CBE02948
UniProt:
A0A9R0BIZ3
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Position
1040187..1042121
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AA seq
644 aa
AA seq
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MENKFLPISKQDMIDRGWEELDFVLVTGDAYVDHHSFGTAIISRVLENAGYKVGIIAQPD
WRTTDDFMKLGKPRLAFLVNAGNMDSMVNHYSVSKKHREKDMYSPGGKMGYRPDRATIVY
CNKIREAYSDVAIVIGGIEASLRRFAHYDYWSDKVRKSMLIDSGADLLVYGMSEKQIVEV
ANALNDGYDPKYIRHIDGTCYISDTLEEIYDKYILIPSYKEICEDKMKYVEAFKIQYDEQ
DPFRGNIIVQPHGSKYLVQNKPEKPLSREELDEVYGLPYQKTYHPVYEKFGGIPAIEEVK
FSIVSSRGCFGSCSFCAITFHQGRAVQSRSEKSIIDEAIGITNLDDFKGYIHDVGGPTAN
FRRPACKKQITKGACKNRQCLSPSPCKNLDADHSEYLHLLRAVRKLPKIKKVFVRSGIRY
DYVMADKNNKFLRELIEHHVSGQLKVAPEHISEEVLKYMQKPAGKTYDKFRQKFFAINEE
LGKKQYLIPYLMSSHPGSTLNSAIELAEYLRDTHYQPEQVQDFYPTPGTLSTTMFYTGID
PLTMKPVYVPKSKRDKAMQRALLQYRAPRNYDLVYSALVEAGREDLIGFGHRCLIKPKNE
KPYFNRNNSKKNVSKGTNKNKKTNTNNRSNKNQQKSSTKKKKKH
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggaaaataagtttttaccaataagcaaacaagatatgatagatagaggatgggaagaa
ttagattttgttctagttacaggagatgcttatgtggaccatcatagttttggaacagca
ataatatctagagttttagaaaatgctgggtataaagttggaataatagctcaaccagac
tggagaactacagatgattttatgaagctaggaaaaccgagacttgcatttctagttaat
gcaggaaatatggattcaatggtcaatcattattctgtaagtaaaaagcatagagaaaag
gatatgtattctccaggtgggaaaatgggttatagaccagatagagctactatagtatat
tgcaataaaataagagaagcatacagtgatgttgcaatagtaataggtggaattgaagcg
agtttaagaagatttgcacactatgattattggagtgataaggttagaaagtctatgtta
atagatagtggagcagatttattagtttatggtatgagtgaaaagcagattgtagaagta
gccaatgcacttaatgatggatatgacccaaaatatattagacatattgatgggacatgc
tatatttcagatacattggaagaaatatatgataaatatatattaattccatcatataaa
gaaatttgtgaagataaaatgaagtatgtagaagcttttaaaattcaatatgatgagcaa
gacccatttagaggtaatataattgttcaacctcatggaagtaagtatctggttcaaaat
aagccagaaaaaccacttagtagagaagaactagatgaagtatatggattaccatatcag
aagacataccatcctgtgtatgaaaaatttggaggaataccagctatagaagaagtaaaa
tttagtatagtaagttcaagaggctgttttggtagttgttcattttgtgcaataacattt
catcaaggtagagcagtgcaaagtagaagtgaaaaatcaattattgatgaagcaatagga
ataacaaatttagatgattttaaagggtatatacatgatgttggaggtccaacagctaat
tttagaagaccagcatgtaaaaaacaaattactaaaggtgcttgtaaaaatagacaatgc
ttatctccatcaccatgtaaaaatttagatgcagaccacagtgaatacttacatttactt
agagctgtaagaaaattacctaaaataaaaaaggtgtttgtgcgttctggaattagatac
gattatgtaatggcagataagaacaataaatttcttagagagttgatagagcatcatgta
agtggtcagttaaaggtagccccagaacatatatcagaagaagttttaaagtatatgcaa
aaaccagcaggaaaaacttatgataaatttagacagaagttttttgctataaatgaagaa
ttaggtaaaaagcaatatttgataccctatttaatgtctagtcaccctggttctacctta
aatagcgctatagagttagcagagtatttaagagatactcactaccaaccagagcaggtt
caggatttttatccaactccagggactctatctacaaccatgttttatacaggtattgac
ccgcttacaatgaagccagtttatgttcctaaatcaaaacgtgacaaggcaatgcaaagg
gctttattacaatatagagcacctagaaattatgatttggtatactctgcgttagttgaa
gcaggaagagaagacttaattggttttggacatagatgtcttataaagccaaaaaatgaa
aagccttattttaatagaaataattctaaaaaaaatgtatctaaaggaacaaataaaaac
aaaaaaactaatacaaataacagaagtaataaaaatcaacaaaaaagttcaactaaaaaa
aagaaaaaacattaa
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