Clostridioides difficile R20291: CDR20291_0873
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Entry
CDR20291_0873 CDS
T00998
Name
(GenBank) putative ABC transporter, permease/ATP-binding protein
KO
K18887
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
cdl
Clostridioides difficile R20291
Pathway
cdl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cdl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CDR20291_0873
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cdl02000
]
CDR20291_0873
Transporters [BR:
cdl02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
CDR20291_0873
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_15
RsgA_GTPase
FtsK_SpoIIIE
DUF87
Motif
Other DBs
NCBI-ProteinID:
CBE02988
UniProt:
A0A9R0BJ07
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All DBs
Position
1064838..1066565
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AA seq
575 aa
AA seq
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MKKLIHFLKPYRVLIVVVLIFTFLQTLGTLYIPTLTANIVNNGVVKGDIDYIVKTGLIMM
IVAGITALSAVLVCKVSANLSSGFCRDIREAVFVKSQDLSINDFNNIGTASMITRSTSDI
TLIGQSVFMFIQLVLPAPIITVSGLFLAYSIDKAMTIIIVVVMFLFMLSAFLVGKKLIKL
FKMMQIKMDNMNRVLREVVTGVRVIRAFNREHFEKKRFDRTAIDYSETAISINKVFAVLM
PIVMLIMNLGIVSIIWFGGMRVSNGNMEIGHIMALIEYCILILFYLIMGVMVFMYIPRAG
ACADRVNQILDIEPEIVDGNGRKDTVSERGHLVFKNVTFSYAQSEEPVLNNITFEAKSGE
VTAIIGSTGSGKSTIANIIPRFFEIQSGEISINGQDVKKIPQKELRDKIGFVPQKAFLFS
GTIEENIRYGKEDASIEEIKHAASIAQADEFISDMEDKYDSFVAQGGNNLSGGQKQRISI
ARALVRKPEVYVFDDSFSALDFKTDKRLRKALKNEIKDSSAIIIAQRISTIMDANQIIVL
NDGKIVGIGKHKDLLENCEVYKQIADSQLSKEELA
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattaattcattttttaaaaccatatagagttttaattgttgtagttttgata
tttacgtttttacaaacacttggaactttgtatataccaacacttacagcaaatatagta
aacaatggtgtagtaaagggagatatagattatattgtaaaaacaggtttaataatgatg
atagtagctggtataacagctttatcagctgtgttagtttgtaaagtatcagcaaatctt
tcatctggattttgtagagatattagagaagcagtatttgtaaaatcacaagatttatca
ataaatgattttaataatataggtacagcatcaatgattactaggagtactagtgatatt
actttaataggtcagtctgtgtttatgtttattcaattggtattaccagcaccaattata
actgtttctggtctattcttagcatattctatagataaagcaatgacaattattattgtt
gtagtaatgtttttattcatgctttcagcatttttagttggtaaaaagcttataaagttg
tttaaaatgatgcaaataaagatggacaatatgaatagggtattacgtgaggtagtaact
ggagtaagagttataagagcttttaatagggagcattttgaaaaaaagagatttgataga
actgcaatagattattctgaaacagcaatttcaataaataaagtatttgcagtacttatg
cctattgtaatgttaataatgaatttaggtatagtaagtattatttggtttggtgggatg
agagtcagtaatggaaatatggagataggtcatataatggcacttattgaatattgtatc
ttaattttattctatttaatcatgggagtaatggtatttatgtacatacctagagcaggt
gcatgtgcagatagagtaaatcagatattagatatagaacctgaaattgtagatggaaat
ggtcgtaaagatactgtctcagagaggggacatttagtatttaaaaatgtaacattttca
tatgcacaatcagaagaacctgtgttaaataatataacatttgaagcaaaatctggagaa
gtaactgcaattataggaagcactggctcaggcaaatctactattgcaaatataatacca
cgtttttttgaaattcaatctggagaaatatctataaatggtcaggatgttaagaagatt
cctcaaaaagaacttagagataagattggatttgtgccacaaaaagcttttttatttagt
ggaacaatagaagaaaatataaggtatggaaaagaagatgcaagtattgaagaaataaag
catgctgcaagtatagctcaagctgatgaatttatttctgatatggaagacaagtatgac
tcatttgtagcacaaggtggaaataatttgtcaggtggtcaaaaacagagaatatccatt
gcaagagcgttagttagaaagcctgaagtatatgtctttgatgatagtttttctgcatta
gattttaaaacagataaaagacttagaaaagcgttgaaaaatgaaatcaaagattcatca
gctataattatagcacaacgtataagtacaatcatggatgctaatcagattatagtttta
aatgatggaaaaattgtaggtattggaaaacataaagatttacttgaaaattgtgaagtt
tataagcaaattgcggattcacaacttagtaaagaagaacttgcataa
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