Clostridioides difficile R20291: CDR20291_0883
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Entry
CDR20291_0883 CDS
T00998
Symbol
potD
Name
(GenBank) spermidine/putrescine ABC transporter, substrate-binding lipoprotein
KO
K11069
spermidine/putrescine transport system substrate-binding protein
Organism
cdl
Clostridioides difficile R20291
Pathway
cdl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cdl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CDR20291_0883 (potD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cdl02000
]
CDR20291_0883 (potD)
Transporters [BR:
cdl02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
CDR20291_0883 (potD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
AF_2299-like_N
ABC2_membrane_3
Phosphonate-bd
Motif
Other DBs
NCBI-ProteinID:
CBE03005
UniProt:
A0A9R0BIZ4
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All DBs
Position
1076997..1078049
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AA seq
350 aa
AA seq
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MIKFKKTISLIAVGMMTVTLFTGCNKATDSTKVLNVYNVGDYIDESLIDKFEKETGIDVQ
YSTYDTNEMMYQKVKSGSTHYDLVFPSDYMVEKMKNEGLLEKLDFKNIPNMKYLDKSFLN
PVYDKTNEYSVAYMWGTLGILYNKKEVKDPMDSWNILWNPKYKGNIMMFDSVRDTIGITL
KKLGYSMNSVNPKEINEAKNLLMKQKDLVLAYVNDEGKDRLLGGEVAMGMLYSGDAVTLM
EQNPDLDYAIPKEGTNKWVDAMCVPTTAQNKKEAELFINFLLDPENAKVNAEYIGYSTPN
TGALKLLDPEITQNPVAYPSKEVLDKCETFEDIGENIKLYDKAWIELKSK
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgattaagtttaaaaaaacaatatcccttatagctgtaggtatgatgacagttacttta
tttacaggatgtaataaagcaactgattctacaaaagttttaaatgtatataatgttgga
gattatatagatgagtctcttatagataagtttgaaaaagaaacaggaatagatgttcaa
tattcaacttatgatactaatgaaatgatgtatcaaaaagtaaagagtggtagtacacac
tatgatttagtatttccttcagactatatggtagagaaaatgaaaaatgaaggtcttttg
gaaaaattagattttaagaatatacctaatatgaaatatttagataagagttttttaaat
cctgtatacgacaaaactaatgaatatagtgttgcatatatgtggggaactcttggaata
ttgtacaataagaaagaagttaaagaccctatggatagctggaatatactttggaatcca
aagtataagggaaatataatgatgtttgactctgttagagatactatagggataactctt
aaaaaattaggatatagcatgaatagtgtaaatccaaaagaaataaatgaagctaaaaat
cttttaatgaaacaaaaggatttagtattggcttatgtaaatgatgaaggtaaggataga
ttgcttggtggagaagtggcaatgggtatgctgtattctggagatgcagttacgctaatg
gagcaaaatcctgaccttgattatgctatacctaaagagggaactaataaatgggtagat
gctatgtgtgtacctacaacagcacaaaataagaaagaagctgagctgtttataaacttt
ttattagacccagagaatgcaaaagtaaatgctgagtacattgggtattcaacacctaat
acaggagcactaaaattattagacccagaaataactcagaatcctgttgcatatccatct
aaagaagtacttgataaatgtgaaacttttgaagatattggtgaaaatataaaattatat
gacaaggcttggatagagttaaaatcaaaatag
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