Clostridioides difficile R20291: CDR20291_0897
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Entry
CDR20291_0897 CDS
T00998
Symbol
addA
Name
(GenBank) ATP-dependent nuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
cdl
Clostridioides difficile R20291
Brite
KEGG Orthology (KO) [BR:
cdl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdl03400
]
CDR20291_0897 (addA)
Enzymes [BR:
cdl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CDR20291_0897 (addA)
DNA repair and recombination proteins [BR:
cdl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CDR20291_0897 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_12
ResIII
DEAD
AAA_30
FKS1_dom1
Motif
Other DBs
NCBI-ProteinID:
CBE03030
UniProt:
A0A9R0BJ22
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All DBs
Position
1106579..1110406
Genome browser
AA seq
1275 aa
AA seq
DB search
MSSPKWTKEQLEVIGSRECNLLVAAAAGSGKTAVLVERIIQMITSRENPIDIDKLLVVTF
TNAAASEMRERIGDAIGKALDENPENKHLQNQLVLLNKSSITTIHSFCLDVIKSNFHRIN
LDPNFRIGDQTECAILKQEAIEEVFEDLYEERDEGFLNLVESYAERGGDKEVQDIILGIY
SFAMASPEPKKWLIDSAERFNIDENFDFSQSIWARAILDTVKIEINGLCLNMERALKEVE
SIEELETFAEKLSVEYKKIANISQACNKSWDEAYKKMASMSFENYVKGVKRISKDAPSYI
KESKEKAKTIRDKTKKSLESIVSATFNKDNDSIREEIKYLYNIVKPISSVVLRFEEEYSN
KKREKGIIDFNDIEHFALNILTDIDEKGNIVPSDIAVGYRNKFYEIFIDEYQDSNLVQEV
LLKAVANTETPNRFMVGDVKQSIYRFRQAKPELFLQKYNNYNDKKGSSHRKIMLYKNFRS
REEVVDAVNYIFENIMNENIGEIEYTEKERLNLGANFNVDTDEKSIIGGATEIHLIQKDN
KLDDDIINDKDDRINNKENEIEEEEKLDNIQLEARMVGNIIKDLMKVNEDGKIQKVYDKG
IDGYRPVEFRDIVILLRATSAWAPVFADELMNMDIPTYADVGVGYFDTIEIKTILSLLQI
IDNPMQDIPLISVLKSPIFGFTPEDLIDIRVQSKDKIFYEVLKSTAEYDGFTDSQNETES
EFIPSEECINKSKDFLIKLKEFKEKSMYMSTDEFIWYLYTRTGYYAYVGALPGGSQRQAN
LKVLFERAKQFEETSLKGIFNFVNFIEKLKKSSSDMGSAKTLGENANVVRIMSIHKSKGL
EFPVVICSAMGKNFNTQDFKKSILYHHNLGYGPQFVDYERRISFPSIAKEALKSKINIEN
LSEEMRVLYVAFTRAKEKLIITGSTRNIQDSIKRWSNGIESLDTISQYEILKGKNFLDWI
MPCVLRHRDLSNLLEEVGLDAVFNVEHNSKWYGKLWNKNDILVEKKSDEEKESIEEILEK
IDVDSPDSDYYSEIEKKLNYIYPYEFSTRKPATISVTEIKKIQNNYEEELINTIFEQKVI
LKKPLFIQNEEEREKISGTERGTIVHLVMEVLDLKNVSSVNDIKSQIRGFVSKGIITEKQ
ASIVNPYKIYKFFASNIGKRMLNAEIINREKSIYAQVNMKDIYIYEKLINNDDKKLYDNE
SVMLRGIVDAYFEEDNQIVLVDYKTDFVNEENINQIIEKYKKQLDLYADIIETLTGKSVK
EKCIYLFGVDEAVCY
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
gtgagttctcctaaatggacaaaagagcaattagaagttataggaagtagagaatgcaat
ttattggttgctgctgctgctggttcaggaaaaacagccgttctagttgagcgtataatt
caaatgataacaagtagagaaaatccaattgatatagataagttattagttgttacattt
actaatgctgctgcgtcagaaatgagagagaggataggggatgctataggaaaagcctta
gatgaaaacccagaaaataaacatttacaaaaccaacttgttttattaaataaatctagt
attacaacaatacactcattctgtttggatgttataaaatcaaactttcatagaataaac
ttagaccctaatttcagaataggagaccaaactgaatgtgctattttgaaacaagaagca
atagaggaagtatttgaagatttatatgaagaaagagatgaggggtttttaaatttagtt
gaaagttatgcagaaagaggaggagataaagaagtacaagatattatcttgggaatatat
tcatttgcaatggcttctcctgaacctaaaaaatggttgattgactcagcagaacgattt
aatattgatgaaaattttgatttttcacagtctatttgggctagagctatattagacact
gtaaaaatagaaattaatggtctttgtctaaatatggaaagggcattaaaagaagtggaa
tcaatagaagaattagaaacttttgcagaaaagttatccgttgaatataaaaaaattgct
aacatttcacaagcatgtaataaatcttgggatgaggcatataaaaagatggcaagtatg
tcctttgaaaattatgtaaaaggagtaaaaagaatttcaaaagatgctccttcgtatata
aaagaatcaaaagaaaaggcaaaaactataagagataagactaagaagtctttagaaagt
atagtaagtgctacattcaataaagataatgattctattagagaagaaataaaatatctt
tataacatagttaaaccaatatctagtgttgtactgagatttgaagaggaatatagcaat
aagaaaagagaaaaaggaataatagattttaacgatatagagcattttgcattaaatata
cttacagatatagatgaaaaaggtaatattgtaccttctgatatagccgttggatataga
aacaagttttatgaaatatttatagatgaatatcaggatagtaatctagtgcaggaagta
ctgcttaaagctgttgcaaatacagaaactccaaatagatttatggttggtgatgtaaaa
cagagtatatatagatttagacaagcaaagccagaattatttttgcaaaaatataataac
tataatgataaaaagggaagttcccatagaaaaataatgctttacaaaaattttagaagt
agagaagaagttgtagatgctgtaaattatatatttgaaaatataatgaatgagaatata
ggagaaattgaatatacagaaaaagaaagactaaatttaggtgcgaattttaatgtggat
acagacgagaaatctattattggtggagcaacggagatacacctaatacaaaaagataat
aaacttgatgatgatattataaatgataaagacgatagaattaataacaaagaaaatgaa
atagaggaagaagaaaaattagataatatacaacttgaggctagaatggttggaaacatt
atcaaagatttaatgaaagtcaatgaagatggaaaaattcaaaaggtctatgataaggga
atagatggatatagacctgtggaatttagagatatagttattcttttaagagctacatct
gcatgggctccagtgtttgcagatgaattgatgaatatggatataccaacatatgctgat
gttggagtggggtattttgatacgattgaaataaaaacaatattgtcattacttcaaata
atagataatccaatgcaagatatacctcttatatctgtattaaaatcacctatatttgga
tttacaccagaggatttgattgatattagagttcagagtaaagataaaattttttatgag
gttttaaaaagtacagcagagtatgatggatttacagattctcaaaatgaaactgagtct
gagtttataccaagtgaagagtgcataaacaaaagtaaagattttttaattaagctaaag
gaatttaaagaaaagtcaatgtacatgagtacagatgaatttatatggtacttgtacaca
aggactggatactatgcttatgttggagcattgccaggtggaagtcaaagacaagctaat
ttaaaagtattgtttgagagagcaaaacaatttgaagaaaccagtcttaaaggaatattc
aactttgtaaattttatagagaaattaaaaaaatctagttctgatatgggaagtgcaaaa
acacttggtgagaatgcaaatgttgttagaataatgagtattcataaaagtaaaggtcta
gaatttccagtagtcatatgctctgcaatgggtaaaaatttcaatactcaagattttaaa
aagagtattttatatcatcataatttagggtatggacctcaatttgtagactatgagaga
aggatttcttttccaagtatagccaaagaagcattaaaaagcaaaataaatatagaaaat
ttatcagaagagatgagagttttatatgttgcatttacaagagctaaagaaaaattgatt
ataactggttctactagaaatatacaagatagtataaagagatggtcaaatggaattgaa
agtttagatacaatatcacaatacgagatattaaaaggtaaaaattttttagattggata
atgccttgtgtattaagacatagggatttatctaatctactagaagaagtaggattagac
gcagtttttaatgttgaacataattcaaaatggtatggaaagttgtggaataagaatgat
attttagtggaaaagaagagtgatgaagaaaaagaaagtattgaagaaattcttgaaaaa
atagatgtagatagtccggacagtgattattacagtgaaatagaaaaaaaattaaactat
atatatccatatgaatttagtacaagaaaacctgctactatatctgttacagaaataaaa
aagatacaaaataattatgaagaagagttaataaatactatatttgaacaaaaagtaata
ttaaaaaagcctctatttattcaaaatgaagaagaaagagaaaaaataagtggaacagaa
agaggtacaatagtccatttggttatggaggttttagacttaaaaaatgtaagtagtgta
aatgatataaaatcacaaataagaggttttgtttcaaaaggtataataacagaaaaacaa
gctagtatagtaaatccatataaaatatataaattttttgcctctaacataggaaaaaga
atgttgaatgctgaaattataaatagagaaaaatcaatttatgcacaagtaaatatgaaa
gacatatatatttatgaaaagcttataaacaatgatgataaaaaactttatgataatgaa
agtgtcatgttaagaggtatagttgatgcttattttgaagaagataatcaaatagttttg
gtggattataaaacagattttgtaaatgaggaaaatataaatcaaataatagagaaatat
aaaaaacagttggatttatatgcagatattattgaaactttaactggtaagtcagtaaaa
gagaaatgtatatatttatttggagttgatgaagctgtttgttattag
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