Clostridioides difficile R20291: CDR20291_0898
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Entry
CDR20291_0898 CDS
T00998
Symbol
sbcD
Name
(GenBank) nuclease subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
cdl
Clostridioides difficile R20291
Brite
KEGG Orthology (KO) [BR:
cdl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdl03400
]
CDR20291_0898 (sbcD)
DNA repair and recombination proteins [BR:
cdl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CDR20291_0898 (sbcD)
Archaeal homologous recombinant proteins
CDR20291_0898 (sbcD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
CBE03031
UniProt:
A0A9R0CDV0
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All DBs
Position
1110452..1111663
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AA seq
403 aa
AA seq
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MRFIHTSDWHLGKSLEGHSRIEEQAKFCEEFIKIVESNEIDMVIIAGDVYDTSNPPAQAE
KLFYQTVSRLANNGQRCVLIISGNHDNPERLSAITPLAHEQGILIYGYPLSATIEAKYKG
FEITYATQGCTKLNINGENIVIATLPYPSEKRLNEVFSSEDEFEKQKNYSEKVGDIFRSL
EENFRSDTINIAVSHIFVIGGESTESERPIQLGGSFLVERKDLPEKAQYTALGHLHKQQK
ASERLNAYYSGSPLQYSKDERAYTKGAYIVDIKAGEKPIIEDVYFNNYKPIEVFKCNGIE
EALDICEQNQDREIWSYFEINTDEIISQNEIKKMKELLKDIIEIKPIITSCYEQESVDIK
EKSMAELFREFYSFSKGVEPKGELMDLFLDIISEEGESADETN
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgagatttattcatacatcagattggcatctagggaagtccctagaaggccattctaga
attgaggaacaagcaaagttttgtgaggaatttataaaaatagtagaatcaaatgaaata
gatatggttataattgctggagatgtatatgatacttctaatcccccagcacaagcagaa
aaactattttatcagactgtatcaagacttgccaataatggtcagaggtgtgtattaata
atttcaggaaatcatgataatccagagagactttctgcaataacacctctagcacatgaa
caggggatacttatatatggttatccattaagtgctacgatagaagctaagtataaaggg
tttgaaataacatatgcaactcagggatgtacaaaactgaatataaatggagaaaatatt
gtgattgctacattaccttatccaagtgaaaaaagattaaatgaagttttttcaagtgaa
gatgagtttgagaaacaaaaaaattattctgaaaaggtaggagatatatttagaagttta
gaagaaaattttagaagtgatactataaatatagccgtatcacatatatttgtaataggt
ggagagagtactgaatcagaaagacctatacaattaggtggaagttttttagttgaaaga
aaagatttgccagaaaaggctcaatatactgcactaggtcatttacataaacaacaaaaa
gcttccgaacgtttaaatgcatactattctggttctccacttcaatatagcaaggatgaa
agagcgtataccaaaggggcatacatagtggatataaaagctggagaaaaaccaataatt
gaagatgtatattttaataattacaaacctatagaagtatttaaatgtaatggaatagaa
gaagcactagatatatgtgagcaaaatcaagatagagagatttggtcatattttgaaata
aatactgatgagataatatcacagaatgaaattaaaaaaatgaaggaactattaaaagac
ataatagaaataaaaccaataataacatcttgttatgaacaagaaagtgtagatataaaa
gaaaagtctatggcagagttgtttagagagttctattcttttagtaaaggtgtagagcca
aaaggagaacttatggatttatttctagatataataagtgaagaaggtgaatcagcagat
gagaccaattag
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