Clostridioides difficile R20291: CDR20291_0964
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Entry
CDR20291_0964 CDS
T00998
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cdl
Clostridioides difficile R20291
Pathway
cdl03030
DNA replication
cdl03410
Base excision repair
cdl03420
Nucleotide excision repair
cdl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cdl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CDR20291_0964 (polA)
03410 Base excision repair
CDR20291_0964 (polA)
03420 Nucleotide excision repair
CDR20291_0964 (polA)
03440 Homologous recombination
CDR20291_0964 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cdl03032
]
CDR20291_0964 (polA)
03400 DNA repair and recombination proteins [BR:
cdl03400
]
CDR20291_0964 (polA)
Enzymes [BR:
cdl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CDR20291_0964 (polA)
DNA replication proteins [BR:
cdl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CDR20291_0964 (polA)
DNA repair and recombination proteins [BR:
cdl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CDR20291_0964 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CDR20291_0964 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
XPG_I
HHH_2
DUF3913
Motif
Other DBs
NCBI-ProteinID:
CBE03147
UniProt:
A0A9R0BJ68
LinkDB
All DBs
Position
1182350..1184998
Genome browser
AA seq
882 aa
AA seq
DB search
MEKKLIIIDGNSIINRAFYALPEMNNKEGLKTNAIYGFTTMLFKMIDIYKPTHISVAFDR
KAPTFRHLEYKEYKAGRKGMPDELAEQLQPLKDLLDKFKINRLEIDGYEADDIIGTVSKK
AENNGYKVYIVTGDKDAIQLASDNTTTLITKKGVGEVEEYNFNSVIEKYEMTPAQFIDLK
GLMGDKSDNIPGVPGIGEKTGIKLIKEFSSIENLIENTDKLKGSVKKKIEENKEIAIQSK
RLATIIRDVPIEVDLDSMVFGDYDKDELLDKFRYFGFTSLLSRLVDLVDSDDTEHVEEKI
EILKLKDTEKFIDEVNKKGQVILKTVRGQGNILEKNIIYIFISVDGEKIYYVDSNEVSKL
DSIFSNNEIKKYGYNLKDDYISLKPYNINLENMYFDITIAEYLIDSTSSTSYDCSAIAMK
YLSKKVKSKEELLGKGVKSKNYEDLEFEDLAEYMGQIICTVKETIPMMERSLMDMSMDGL
FYHVEMPLVEVLGHMEYEGIKVDKSILDELSVEFKEIIATLEKEIYELSGEPFNINSPKQ
LGVILFEKLELPIIKKTKTGYSTNADVLEKLRDKHPIIDKITEYRQIVKLNSTYVEGLLN
IINPESNRIHSSFNQTITTTGRISSTEPNLQNIPIKMEMGRKIRKVFIADDNCKLVDADY
SQVELRVLAHMSQDENMIEAFKHHEDIHTKTASQVFNVPMEDVTSELRGAAKAVNFGIIY
GKSDFGLADDLNIPVPKAKEYIESYFAKYHKIKEFMDTTVEKASEDGYAVTILNRRRYIP
EIKSSNFMERNRGKRFAMNAPIQGSAADIIKIAMINVHKKLEENNLKSKLILQVHDELIV
EAIDDEIDIVKKIVKEEMENAVNMDVHLDVDLNVGSSWYETK
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaaaaaattaattataatagatggaaattcaataataaacagagccttttatgct
ctgccagaaatgaataataaagaagggttaaagaccaatgcaatatatggatttacaaca
atgctatttaaaatgatagatatatataaaccaacacatataagtgtagcctttgacaga
aaagcacctacatttagacatttagaatataaagagtataaggctggaagaaagggaatg
ccagatgaactggcagaacaattacagccattaaaagaccttttagataaattcaaaata
aatagattggaaatagatgggtatgaggcagacgacattataggaactgtttctaaaaaa
gcagaaaataatgggtataaggtatacatagtaactggagacaaagatgctattcaactt
gcttcagataatacaactactcttataacaaaaaaaggagttggagaagttgaagaatac
aactttaattctgtaattgaaaaatacgagatgactccagcacaatttattgatttaaaa
ggtcttatgggagataagtcagataatatacctggagtacctggaatcggtgaaaaaaca
ggtataaagcttataaaagagttttctagtatagagaatttaatagagaatacagataag
cttaaaggtagtgtaaaaaagaaaatagaggaaaataaagaaatagctattcaaagtaaa
agacttgcaacaattataagagatgtgccaatagaagtggatttagatagtatggttttt
ggcgattatgataaagatgaacttttagataaatttagatactttggatttacaagtctc
ttatcaagattagttgatttggtcgattcagatgacacagaacacgtagaagaaaaaata
gaaatattaaaattaaaagatacagaaaaatttatagatgaagtaaacaaaaaaggacaa
gttattttaaaaactgttagaggacaaggtaatatacttgaaaaaaatataatatatatt
tttataagtgtagatggagaaaaaatatattatgtagattcaaatgaagtgtcaaagtta
gatagtatattttcaaataatgaaattaaaaagtatggatataatttaaaagatgattat
atatctttaaaaccatataatataaacttagaaaatatgtattttgatataacaatagct
gagtacttaatagattcaacttcatctacctcatatgattgtagtgcaatagctatgaag
tatttatcaaaaaaggttaaatcaaaagaagaattattaggaaagggtgttaaatctaaa
aactatgaggatttagaatttgaggatttagcagagtatatgggtcaaataatatgcaca
gttaaagaaacaattcctatgatggaaagaagtctaatggatatgagtatggatggtctt
ttttatcatgtagagatgcctttagtagaagtcttaggtcatatggagtatgaaggtata
aaagtagacaaaagtatattggatgaattgagtgtagagtttaaagaaataatagctaca
ctagaaaaggaaatttatgaattatcaggagagccattcaatataaattcaccaaaacaa
ttgggtgttatattatttgaaaaattagagcttccaataattaaaaaaactaaaactgga
tattcaactaatgcagatgttttagaaaaattaagagataagcatccaataatagataag
ataactgagtatagacaaatagtaaagttaaattctacttacgttgaaggacttttaaat
ataataaatccagaaagtaatagaatacattcatcatttaatcaaactataacgactaca
ggaagaatttcatctacagaaccaaatcttcaaaatatacctataaaaatggaaatgggt
agaaaaataagaaaagtgtttattgcagatgataactgtaagttggttgatgccgattac
tcacaagtagagctaagagttcttgcacatatgagtcaggatgaaaatatgatagaagca
tttaaacatcatgaagatattcataccaaaacagcttcacaagtttttaatgttcctatg
gaagatgttactagtgaattgagaggtgcagctaaagctgtaaactttggtattatatat
ggtaaaagtgactttggtctagctgatgatttaaatatacctgttccaaaggcgaaagaa
tatatcgaaagttattttgctaaataccataaaataaaagagtttatggacacaacagta
gaaaaggctagtgaggatggatatgctgtaacaattttaaacagaagaagatatatacca
gaaataaagtcaagcaattttatggaaagaaatagaggaaagagatttgcaatgaatgca
ccaatacaaggaagtgcagcagatataataaaaattgctatgataaatgttcataaaaaa
ttggaagagaacaatttgaaatcaaaacttatactacaagttcacgacgagttgatagtt
gaagcaattgatgatgaaatagatatagttaagaaaatagtaaaagaagaaatggaaaat
gctgtaaatatggatgttcacttagatgtagatttaaatgtaggtagttcttggtatgag
acaaagtag
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