Clostridioides difficile R20291: CDR20291_1060
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Entry
CDR20291_1060 CDS
T00998
Symbol
xerD1
Name
(GenBank) putative tyrosine recombinase
KO
K04763
integrase/recombinase XerD
Organism
cdl
Clostridioides difficile R20291
Brite
KEGG Orthology (KO) [BR:
cdl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cdl03036
]
CDR20291_1060 (xerD1)
Chromosome and associated proteins [BR:
cdl03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
CDR20291_1060 (xerD1)
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GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Phage_int_SAM_5
DUF6495
Motif
Other DBs
NCBI-ProteinID:
CBE03323
UniProt:
A0A9R0CDZ4
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All DBs
Position
1275453..1276367
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AA seq
304 aa
AA seq
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MDIIEGYIDYIKDKKKLSENTVASYFMDIKKYMEYINQKSIKLVDIVENDIISYLIKLEK
DNVSIATIARMISSIKSFHDYLFLNHICTNNPAKDIKKPKIKKENINILTEEEIERLLNF
PKLTTPKLIRDKAIFEVLYGTGIKVSELVEMNIEDIDLDIDYIYCNSCCKNQRVIPLCDI
TKLYLEKYLKEARPKMAVEGEKSLFVSSLGQRFTRQGLWKVIKKYSNLANIDKNINPTML
RHSFAIHLLNEGANIAVVSKILGNVNLSSLQVYLNHIDKNVRREIKEKHPRNDVDVELQK
AEAK
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggatattatagagggatatatagattacataaaagataaaaaaaaattatcagagaac
acagtggcatcatactttatggatataaaaaaatatatggaatatataaatcaaaaaagc
attaaactagtagatatagtagaaaatgatattataagttacttaataaagttggaaaaa
gataatgtatcaatagctacaatagcgaggatgatatcctctataaaatcttttcatgat
tatttatttttaaatcatatatgtacaaataatcctgcaaaggatataaaaaaacctaaa
ataaaaaaagaaaatataaatatacttacagaagaagaaattgaaagactattaaatttt
ccaaagttaacaacacctaaattgattagggacaaggctatttttgaagtattatatggt
actggtataaaagtatctgaattagtagagatgaatatagaggatattgacctagatatt
gattatatatattgtaattcatgttgtaaaaatcaaagagtgataccactttgtgatatt
acaaaactttacttagaaaagtatctaaaagaagcaagacctaaaatggctgtagaaggt
gaaaaatcattattcgtaagttcattaggtcaaaggtttacacgacaaggtctttggaaa
gtcataaaaaaatattctaatctagccaatatagataaaaatataaatcctacaatgctt
agacattcatttgctattcatttgttaaatgaaggtgctaacattgctgttgtaagtaaa
attttaggaaatgttaatttatctagtttgcaagtatatttaaatcatatagataaaaac
gtgagaagagaaataaaggaaaaacatcctagaaatgatgttgatgtagaattacaaaaa
gcagaagctaaatag
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