Clostridioides difficile R20291: CDR20291_1087
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Entry
CDR20291_1087 CDS
T00998
Symbol
rnc
Name
(GenBank) putative ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
cdl
Clostridioides difficile R20291
Pathway
cdl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cdl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CDR20291_1087 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdl03019
]
CDR20291_1087 (rnc)
03009 Ribosome biogenesis [BR:
cdl03009
]
CDR20291_1087 (rnc)
03036 Chromosome and associated proteins [BR:
cdl03036
]
CDR20291_1087 (rnc)
Enzymes [BR:
cdl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
CDR20291_1087 (rnc)
Messenger RNA biogenesis [BR:
cdl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CDR20291_1087 (rnc)
Ribosome biogenesis [BR:
cdl03009
]
Eukaryotic type
90S particles
RNase
CDR20291_1087 (rnc)
Prokaryotic type
rRNA processing factors
CDR20291_1087 (rnc)
Chromosome and associated proteins [BR:
cdl03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
CDR20291_1087 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
CBE03371
UniProt:
A0A9R0BJI6
LinkDB
All DBs
Position
1306823..1307533
Genome browser
AA seq
236 aa
AA seq
DB search
MKISKKLLDNIQRFENVINYKFKNKEYILEALTHSSYSNENKKYNFNERLEFLGDSVLGI
VISDYLFNEEANLPEGELTKLRANIVCEDSLSEVANDINLGIHMLLGRGEEATGGRHRTS
ILADAFEAVIAAIYLDGGFESARQFILHHMENIIYDSRKGNIFRDYKTHLQEVLQGNGEN
NIWYRLIEEKGPDHNKRFVMEVGINDDVLGIGEGKSKKEAEQLAAKIALKKKLWEK
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataagtaaaaaattactagataatatacaaagatttgaaaatgttataaattat
aaatttaaaaataaagaatatatactagaagctcttactcatagttcatattctaatgaa
aataaaaaatataattttaacgaaaggttggaatttttaggggattcggttttaggcata
gtgataagtgattatttatttaatgaagaagctaatctgcccgaaggggaactaactaaa
cttagagcaaatatagtttgtgaagattcgttaagtgaagtagctaatgatataaattta
ggtattcatatgttattaggtagaggagaagaagcaacaggaggaagacataggacttca
atattagcagacgcatttgaagctgtaatagctgctatatatcttgatggaggttttgaa
agtgcaagacagtttatacttcatcatatggaaaatataatttatgattcaagaaaagga
aatatatttagagactacaaaacgcatcttcaagaagtgttacaagggaatggagaaaat
aatatctggtacaggcttatagaagaaaaaggaccagaccataataaaagatttgtaatg
gaagttggaattaatgacgatgtattgggtataggagaaggaaagagtaaaaaagaagct
gaacagttagctgctaaaatagctttaaagaaaaaattatgggaaaaataa
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