Clostridioides difficile R20291: CDR20291_1089
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Entry
CDR20291_1089 CDS
T00998
Symbol
smc
Name
(GenBank) chromosome partition protein
KO
K03529
chromosome segregation protein
Organism
cdl
Clostridioides difficile R20291
Brite
KEGG Orthology (KO) [BR:
cdl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cdl03036
]
CDR20291_1089 (smc)
Chromosome and associated proteins [BR:
cdl03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
CDR20291_1089 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_29
Crescentin
DUF4200
Mce4_CUP1
ATG16
PUMA_CC
SKA1
DUF2968
XhlA
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
CBE03375
UniProt:
A0A9R0BJA0
LinkDB
All DBs
Position
1308685..1312239
Genome browser
AA seq
1184 aa
AA seq
DB search
MYLKRLELKGFKSFPVKTDIIFKEGITAIVGPNGSGKSNISDAVRWVLGEQSIKSLRGDK
LEDVIFAGTDTKKPMNYCEVALTIDNSENQLELDFTEVTIRRRAYRNGESEFFLNNKSCR
LKDIKEVFLDTGIGKDGYSIIEQGKVDEILSNNPLSRRKVFDEACGISKYRYKKQEAERN
LSNTKENLERIDDVYIEIENQLKPLFNQQTKAKKYLEISEKLKILEVNSFIREIEGIEKE
LSEVNEHRKVIEKELNEKEEQKNVVEKKQEDINKEVEVLQDVIEKSVDYINSIKGVISKK
ESQINLIKERIRNFTNEISRKNLEINDIKEKLNENKQYIKELESNKLSGSEELSTLQENI
KVLEASKDKQKIKLESLNNEIELLKESIIDILNKKQEFSNKLSTLNANKENMNIRDENIN
SEITELNKNIEIKSSELDTINKEFNMQNENLKNVNNRHKELSINLQDSISEHNKLEDEIQ
KSKYNLNGYNSKLNVYIDMENHYEGFNRGVKEVLKNKNLKGVHGALGQIINVPEKYEKSI
EAALGAYMQNIITDNEFSAKSAINYLKQNNLGRVTFLPLNIIKSNKVSLGNLKANTKFIG
IASDLITFDEKYRNIIENILGRTILINNIDEGIKFAKETGHRFKIVTLDGEILNPGGSLT
GGSLKTNGNILSRKRYINEYTEKISNIKNEISHLELKRESLDKDVKNIKNEIDSHESKIK
DLEKSIIIKSTSIKNVESEIESLKGSITKLENEKNDLNSNLNYTLEKSDDVRKDMEELDD
LYNKNKEKIDALNEEIKRYNDLYDKEKSEFDELNLSLVKKTEAYNSIVRDIKRISGENCE
LEEKNKQLEESLNYEEHEIIKLQDSIATEEKEKENLTKQLGDSNRNLETRKIAKDDLKNS
FDEINKELKTIDRQHIELKESLFKVGGRLERLKTSQDTYINKLFEQYDMTLVQALEIKDE
DLDIDRKFLESLKREIRSLGNINIGSIKEYEEIKERYDFYSEQKQDLEESMEEIEKLIHT
LEENMKSEFEIKFEEISKNFKYVYKRLFGGGCGELTILDKENLLESDILITAQPPGKKMK
NLNLLSGGEKALTAISILFAILITKPTPFCILDEIEAPLDDANIFRFGEFLKDLSKETQF
ISVTHRRGTMEAADYIYGVTMQEKAISKVISLKLKEAQEITDII
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
ttgtatttaaaaagactagagttaaagggatttaaatcctttccagtaaaaacagatatt
atttttaaagaaggaataacagccatagtaggaccaaatgggagtggaaaaagtaatata
tctgatgctgtaagatgggtattaggagaacagagtattaagagtcttagaggtgataaa
ctcgaagatgtaatatttgcaggtacagatacaaaaaaacctatgaattattgtgaagtg
gctcttactattgataattctgaaaatcaattggaattagattttacagaagtaactata
agaagaagggcttatagaaatggtgaaagtgaattttttctaaataataaaagttgtaga
ttaaaagatataaaagaagtctttttagatactggtattggaaaagatggttattcaatc
atagaacaaggaaaagtagatgaaatattaagtaataatcctttaagcagaagaaaagtt
tttgatgaagcttgtggcatatcaaaatatagatataaaaaacaggaagcagaaaggaat
ttaagtaatacaaaggaaaatttagaaagaatagatgatgtatatatagaaattgaaaat
caattaaagcctctttttaatcaacagacaaaggcaaaaaagtacttggaaataagtgaa
aaattaaagatacttgaagtaaatagctttataagagaaattgaaggaatagaaaaagaa
ttaagtgaggttaatgaacatcgtaaggttattgaaaaggagctcaatgaaaaagaagaa
caaaaaaatgttgtagagaaaaagcaagaagatattaataaagaggtagaggtattacaa
gatgtaattgaaaaatctgtagattatataaattcaattaaaggagttatatcaaaaaaa
gagtcccaaataaatttaattaaggaaagaataagaaattttacgaatgaaattagtaga
aaaaatttagaaataaatgatataaaagagaagctaaatgaaaataagcaatacataaaa
gaattagaaagtaataaattatcaggtagtgaagaactatctaccttgcaggaaaatata
aaagtattggaggcaagtaaagataaacaaaaaattaagttagaatccctaaataatgag
atagaattattgaaagaaagtataattgatatattaaataagaaacaagagtttagtaat
aagctgtccactttaaacgcaaataaagaaaatatgaatatcagagatgaaaatataaat
tcagagataacagagttaaacaaaaatattgaaataaaatcatctgaattagatactata
aataaagaatttaatatgcaaaatgaaaatttaaagaatgtaaataatagacataaagaa
ttatcaattaatttgcaggattcaattagtgaacacaataaactagaagatgaaatacag
aaaagtaaatataatttaaatggatataattcaaagttaaatgtctatatagatatggaa
aatcattatgaaggatttaatagaggagtaaaagaagtactaaaaaataaaaatttaaaa
ggagttcatggagcattaggacaaattataaatgtacctgaaaaatatgagaaatctata
gaagcagctcttggtgcttatatgcaaaatataataactgataatgagtttagtgctaag
tctgcaataaactatctaaaacagaataatttaggtagagtaacatttcttccattaaat
ataattaaatcaaataaagtaagtctaggaaatttaaaagcaaatactaagttcatagga
atagcaagtgatttaattacatttgatgaaaagtatagaaatataattgaaaatatactt
ggaagaacaatacttataaataatatagatgagggcataaaatttgcaaaagaaactggt
cataggtttaaaatagtaactttagatggtgaaatcttaaatccaggaggttctttgact
gggggaagtctaaaaactaatgggaatatactatcgagaaaaagatacattaatgaatat
acagaaaagataagtaatatcaagaatgaaatttcacatctagaattaaaaagagaatct
ttagacaaagatgtgaaaaatatcaaaaatgaaattgattcacatgaaagtaaaataaaa
gatttagaaaaaagtataataataaaaagtacaagtataaagaatgttgaatctgaaatt
gaatcgttaaaaggtagtattactaaattagaaaatgagaagaatgatttaaattctaat
ctaaattatacacttgaaaaaagcgatgatgttagaaaagatatggaagagttagatgat
ttatacaataaaaataaagaaaaaattgatgcattgaatgaggaaataaaaagatacaat
gatttatatgataaagaaaaatctgaatttgatgaattgaacttaagtttagtgaagaaa
acagaagcttataatagtatagttagagatataaaaagaatatctggtgaaaattgtgag
ctagaagaaaagaataaacaattagaagagtcattaaattatgaagaacatgaaataatt
aaattacaagattctatagccactgaagaaaaagaaaaagaaaatttaacaaaacaacta
ggggatagtaatagaaatcttgaaactagaaaaatagcaaaagatgatttaaaaaatagt
tttgatgaaattaataaagaattaaaaactatagatagacagcatatagagcttaaagaa
agtttatttaaagttggtggaagattagaaagattaaaaactagtcaagacacatatata
aataagttgtttgagcaatatgatatgactttagtacaagcattggaaattaaagatgaa
gatttggatatagatagaaaattcttagaaagtctaaagagagaaataagaagtcttgga
aatataaatataggctctataaaggaatatgaggaaataaaagaaagatacgatttttat
agcgaacaaaagcaagatttagaagagtctatggaagagatagaaaaacttatacacact
ttagaagaaaatatgaaatctgaatttgaaattaagtttgaagaaataagtaaaaatttt
aaatatgtatataagagattatttggtggaggttgtggagaattaactattttagataaa
gaaaatttattagaaagtgatatactaataacagctcaacctccagggaaaaaaatgaaa
aatttaaatctattatctggtggagagaaagctttaacagcaataagtatattatttgct
atattgattacaaagccaacaccattttgtatattagatgagattgaagcgccacttgat
gatgcaaatatatttagatttggagaatttttgaaggatttatctaaagagactcaattt
atatcagtaactcataggagaggaactatggaagctgctgattatatctatggagttaca
atgcaagaaaaagccatttcaaaagttattagcttaaaattaaaagaagctcaggaaata
acagatattatataa
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