Clostridioides difficile R20291: CDR20291_1092
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Entry
CDR20291_1092 CDS
T00998
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
cdl
Clostridioides difficile R20291
Pathway
cdl02024
Quorum sensing
cdl03060
Protein export
cdl03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
cdl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
CDR20291_1092 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
CDR20291_1092 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CDR20291_1092 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
cdl02044
]
CDR20291_1092 (ffh)
Enzymes [BR:
cdl01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
CDR20291_1092 (ffh)
Secretion system [BR:
cdl02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
CDR20291_1092 (ffh)
Eukaryotic Sec-SRP protein
CDR20291_1092 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_22
AAA_31
AAA_30
AAA_33
APS_kinase
MeaB
6PF2K
Motif
Other DBs
NCBI-ProteinID:
CBE03380
UniProt:
A0A9R0BJE0
LinkDB
All DBs
Position
1314014..1315366
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AA seq
450 aa
AA seq
DB search
MIFEGLSDKLQGAFSKLKSKGKLTEVDVKNAMREVKLALLEADVNFKVVKDFIKKVQERC
VGQEVMQSLTPAQHVIKIVNEELTSLMGDVQSKVMISSKPPTILMMVGLQGAGKTTTAGK
LGGYFKKQGKKPLLVACDIYRPAAIKQLQVVGEKLDIPVFNMGDKENPVNIAKAGLSHAI
KNANDLVIIDTAGRLHIDEVLMAELKSIKSEVKPHEILLVVDSMTGQDAVNVAESFNEAL
GVDGVVLTKLDGDTRGGAALSIRAVTQKPIKFMGMGEKLDDIEPFHPDRMASRILGMGDV
LSLIEKAQENIDLEKAKELEQKIKKQELDFEDFLQQMEQIQNMGPLDKILGMIPGMGNVK
DQLGDVDLNGKEMKRTKAIIQSMTTYERRNPGVLNASRKKRIAKGSGTSVQDVNRLIKQL
NEMKKMMKMFAGSQKSMKKRGGLGGLPFFK
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgatatttgaaggattgtctgataaactacaaggggcatttagtaagttaaaatctaaa
ggaaaacttacagaagtagatgtaaaaaatgctatgagagaagttaaacttgctcttctt
gaggcagatgttaactttaaagtagttaaagatttcataaaaaaagttcaagagagatgt
gttggacaagaagttatgcaaagcttaactccagctcagcatgtaatcaaaattgtaaat
gaagagcttacaagtttaatgggagatgtacaaagtaaagtaatgatttcctcaaagcct
cctacaattttaatgatggttggattgcaaggtgcaggtaagactactacagcaggaaaa
cttggaggatattttaaaaagcaaggtaaaaaacctctattagtagcttgtgatatttat
agaccggcagctataaagcaacttcaagttgttggagaaaaattggatatacctgtattc
aatatgggagataaagaaaatccagtaaatattgcgaaagcaggtttaagccatgcgatt
aaaaatgctaatgatttagttattatagatacagctggtagacttcatatagatgaagta
cttatggctgagttaaagtctattaaatcagaagttaagccacatgagatacttttggtt
gtagattctatgacaggtcaagatgctgtaaatgttgcagaaagcttcaatgaggcactt
ggtgttgatggagtagtattaactaaattggatggagatactagaggtggtgctgcactt
tcaataagagcagttacacaaaagcctataaaatttatggggatgggagaaaagctagat
gatatagaacctttccacccagatagaatggcatcaagaatattaggtatgggagatgtc
ttaagtttaatagaaaaagcacaagaaaatatagacttagagaaagctaaagaattagag
caaaaaattaaaaaacaagagcttgattttgaagatttcttacaacaaatggaacaaata
caaaatatgggacctcttgacaagatacttggtatgatacctggtatgggaaatgtaaaa
gaccaacttggagatgtagatttgaatggcaaagaaatgaagagaacaaaagccataatt
cagtcaatgactacatatgagagaagaaacccaggagtattaaatgcttcaagaaagaaa
agaatagctaagggcagtggaactagtgtacaagatgtaaatagacttataaaacaactt
aatgaaatgaaaaaaatgatgaagatgtttgctggttcacaaaagagtatgaagaaaagg
ggcggcttaggcggtttacctttttttaaataa
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