Clostridioides difficile R20291: CDR20291_1114
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Entry
CDR20291_1114 CDS
T00998
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cdl
Clostridioides difficile R20291
Brite
KEGG Orthology (KO) [BR:
cdl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cdl03032
]
CDR20291_1114 (topA)
03400 DNA repair and recombination proteins [BR:
cdl03400
]
CDR20291_1114 (topA)
Enzymes [BR:
cdl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CDR20291_1114 (topA)
DNA replication proteins [BR:
cdl03032
]
Prokaryotic type
DNA Topoisomerases
CDR20291_1114 (topA)
DNA repair and recombination proteins [BR:
cdl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CDR20291_1114 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Toprim_2
FtsK_SpoIIIE_N
Motif
Other DBs
NCBI-ProteinID:
CBE03419
UniProt:
A0A9R0BJE3
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All DBs
Position
1337441..1339528
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AA seq
695 aa
AA seq
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MAKTLVIVESPAKAKTIEKFLGKSHYTVKASVGHVRDLPKSKLGVDIENNFEPQYINIRG
KGDVIKELKKEAKKSKQVYLATDPDREGEAISWHLAHILNLDESEDCRIEFNEITKDAIK
KAIKHPRNIDINLVDAQQARRVLDRLLGYQISPILWQKVRKGLSAGRVQSVTTKLICDRE
KEIKAFIPKEYWTIDVEAKTVKDKDITLKFYGKNDEKIELENEEAVNEILKEMEGKDLKV
EKIESKSRRKSAPKPFTTSMLQQEGANKLFFTTKKTMMIAQELYEGIDIEGEGTVGLISY
IRTDSKRISDEAKEKAKGYIVNNLGENYYKNTGDKKEKKDTKKVQDAHEAIRPTSVDRTP
ESIKASLSKDQYKLYNLIWRRFVASQMEDSVFDILNVECKIGDIVFKATGSKMKFDGYTK
VYNFSEREDKILPSIEKGDILNIENILPDQHFTQPPARYTEASLVKTLEELGIGRPSTYA
PTIATILNREYVEKQGTSLCPTELGIIVTDILENNFHKFIDVDFTADMESKLDVIEEGNT
DWKKIVSESYAPLKEAIEEALENIEKVNMDEETDEICENCGSNMVIKYGRFGKFMACKNY
PDCKTTRPIMNKIGVKCPKCEEGDIILRKSKRGKAFYGCSNYPNCDFVAWNKPTGEFCEK
CGSYMVEKVTKSETKTVCSNKECNKETKEHNDGKE
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaacattagtcatcgtagaatcgcctgcaaaagctaaaactatagaaaaattt
ttagggaaaagtcattacacagttaaagcatcagttggtcatgtcagagatttacctaaa
agtaaattaggtgtagatatagaaaataattttgaacctcaatatataaatataagagga
aaaggcgatgtaataaaagaattaaaaaaagaagctaaaaaatctaaacaagtatatcta
gcaactgaccctgatagagaaggtgaagctatatcatggcatttagctcatatactaaat
ttagatgaatctgaggattgtagaatagagtttaatgagataactaaggatgcaattaaa
aaagcaattaaacatcctagaaatattgatataaatttggttgatgcacaacaggcaaga
agagtgctagacagacttttaggttatcaaataagtcctatattatggcaaaaggttaga
aaaggtcttagtgcaggtagagtgcaatctgttacaacaaagttaatttgtgatagagaa
aaagaaataaaggcatttattccaaaagaatactggacaatagatgttgaggctaagaca
gtaaaagacaaagatataactttgaaattttatggtaaaaatgatgaaaagattgaatta
gaaaatgaagaagctgtaaatgaaatactaaaagaaatggaaggtaaagatttaaaggtt
gagaagatagaatctaaatcaagacgtaaatcagctccaaaaccatttacaacaagtatg
cttcaacaagaaggagcaaataagttattttttactactaaaaaaacaatgatgatagca
caagaattatatgaaggtatcgacatagaaggtgaaggtactgttggtcttatatcatat
ataagaactgactctaaaagaatatctgatgaagcaaaagaaaaagctaagggttatatc
gtaaacaatttaggagaaaactactataaaaacactggtgataaaaaagaaaaaaaggat
actaaaaaggttcaagatgcccatgaggcaataagaccaacctcagttgatagaactcca
gagagtataaaagcctcattgagcaaagaccagtacaagttatacaatttaatttggaga
agatttgtagctagtcaaatggaagattcagtgtttgatatactaaatgtagaatgtaaa
ataggcgatattgtatttaaggcaactggttcaaaaatgaaatttgatggttataccaag
gtatataatttttcagaaagagaagacaaaattttaccaagtatagaaaaaggagatata
ttaaatatagaaaatatattgccagaccaacattttacacaaccaccagcaagatataca
gaagctagtttagtaaaaacactagaagaactaggtataggtagaccaagtacgtatgct
ccaacaatagctactatactgaatagagagtatgttgaaaagcaaggaacaagtctatgt
ccaacagaacttggaataatagttactgatattttggaaaataatttccataaatttata
gatgtagattttactgctgatatggaaagtaaacttgatgttatagaagaaggcaataca
gattggaaaaagattgtatcagaatcatatgcaccacttaaagaggctattgaagaagct
cttgaaaatatagaaaaagtaaatatggatgaagaaactgatgagatttgcgagaactgt
gggtctaatatggttatcaaatatggtagatttggaaagtttatggcttgtaaaaactat
cccgattgtaaaacaactagaccaattatgaataaaattggtgttaaatgtccaaaatgt
gaagaaggagatattatacttagaaaatctaaaagaggtaaagctttttatgggtgttct
aattatccaaactgtgactttgtagcttggaataagccaacaggagagttttgtgagaag
tgtggttcatatatggttgaaaaagtgactaaatctgaaacaaaaacagtgtgttctaat
aaagaatgtaataaagagacaaaagagcataatgacggaaaagagtga
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