Clostridioides difficile R20291: CDR20291_1487
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Entry
CDR20291_1487 CDS
T00998
Name
(GenBank) putative ribose ABC transporter, substrate-binding lipoprotein
KO
K10439
ribose transport system substrate-binding protein
Organism
cdl
Clostridioides difficile R20291
Pathway
cdl02010
ABC transporters
cdl02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
cdl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CDR20291_1487
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
CDR20291_1487
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cdl02000
]
CDR20291_1487
Transporters [BR:
cdl02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
CDR20291_1487
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_6
Peripla_BP_1
Peripla_BP_3
ANF_receptor
DUF6506
Bmp
Rhodanese
Motif
Other DBs
NCBI-ProteinID:
CBE04082
UniProt:
A0A9R0CEF2
LinkDB
All DBs
Position
1754980..1755942
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AA seq
320 aa
AA seq
DB search
MKKLMKHLALLLSLVMIFGLVGCSNGGDKEKNGEKKIAVLLPGSTGYFVATKQGIDAKSK
ELGVSVEYADAQWDASKQLSQAEDFMAKGVDMIALCGVDSAVSERIVKAANDSDVPIVAF
TNSIGSNPTGEFKGLVTYIGQNEEETGALTGKIAKNLLGETGGKAVLIEGVPGTTPQVLR
KKGLEKELKDSNIEIVYNQTSNWEKEQALKVTEDLIQKKTDFNVIICQDDNSATGAGQAL
KDAGLKDKVKVIGLGGSKDGLKAITDGLIDGTTYMSAVEEGGLVIEKASKFLKGEKIEPV
TQIKQVEVNKDNISEFKGEW
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattaatgaaacatttagcattgttgttatcacttgttatgatatttggttta
gttggttgttcaaatggtggtgacaaagaaaaaaatggagaaaagaaaatagcagtatta
ctaccaggttcaacaggttactttgtagcaactaaacaaggtatagatgcaaaatctaaa
gaattaggtgtaagcgtggaatatgcagatgctcaatgggatgctagtaaacaattatca
caagctgaagattttatggctaaaggggtagacatgattgcattatgtggagttgattct
gctgtaagtgagagaatagttaaagctgctaatgattcagacgtccctatagtagcattt
acaaattctataggaagtaacccaactggagaatttaaaggtttagttacatatatagga
caaaatgaggaggaaacaggagcactaactggaaaaattgctaaaaacttattaggagaa
actggtgggaaagctgtattaatagaaggagtaccaggaactactccacaagtattaaga
aaaaaaggtcttgaaaaagaattaaaagatagtaatatagaaatagtttataatcaaact
tcaaattgggagaaagagcaagctttaaaagtaacagaagatttaattcaaaagaaaact
gattttaatgttataatatgtcaagatgataattctgctacaggtgcaggtcaagcttta
aaagatgctggtcttaaggataaagttaaagtcataggtttgggtggaagtaaagatgga
ttaaaagctataactgatgggttaatagatggtacaacttatatgtctgctgtagaagaa
ggtggattagtcatagaaaaggcatctaaattccttaaaggtgaaaaaatagaacctgtt
acacaaattaaacaagttgaagttaacaaagataatatttcagagttcaagggtgaatgg
taa
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