Clostridioides difficile R20291: CDR20291_1519
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Entry
CDR20291_1519 CDS
T00998
Name
(GenBank) putative mechanosensitive ion channel protein
KO
K03442
small conductance mechanosensitive channel
Organism
cdl
Clostridioides difficile R20291
Brite
KEGG Orthology (KO) [BR:
cdl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cdl02000
]
CDR20291_1519
Transporters [BR:
cdl02000
]
Other transporters
Pores ion channels [TC:
1
]
CDR20291_1519
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Motif
Other DBs
NCBI-ProteinID:
CBE04138
UniProt:
A0A9R0CED5
LinkDB
All DBs
Position
1789455..1790339
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AA seq
294 aa
AA seq
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MDTTKIDDISKLDLNNLDINKMDMGGIMESLLEWATTSGVKLIIGILILSIGFKIIKKFV
NHVMLVLSKRDIDLTLRRFLKSLLLSVLKVAVIIIVLEYWGMSLSSFAAVIASAGVAIGL
ALQGSLSNFAGGFIILLIRPFKVGDYVEAAGHGGTVEQIGLFYTQLVTPDNKQILIPNGS
VSNDSLINYSAKNTRRVDLTFSVGYEDDILHVRRVLKDIVNNHKLIINEPEPFIGVVEHG
DNAVKFATRVWCKTEDYWTIYLDLLEEVKVRFDEEGITIPYPKMDLTVKELNKI
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggatacgacgaaaatagatgatataagcaagttagatttaaataatttagacattaat
aagatggatatgggaggtataatggaaagtctgctagaatgggctactacaagcggagta
aaacttataataggtatacttatactttctattggatttaaaataataaaaaaatttgta
aaccatgttatgttagtacttagtaaaagagatattgatttaactttaagaaggtttttg
aagtctcttcttttgagtgtacttaaagttgccgttataatcattgttctggaatattgg
ggaatgagtttgtccagttttgctgctgtgatagcatcagcaggggtagcaataggtttg
gctttacaaggtagtctatcaaattttgctggaggatttattatactattgattagacct
tttaaagtaggagattacgtagaagcagcaggccatggaggaacggttgaacaaatagga
cttttttatacacaattggttactccagataataaacagatacttatacctaatggttct
gtatcaaatgatagtctaataaactattcagcaaagaatactagacgagttgatttgact
tttagtgtagggtatgaagatgatatactacatgttagaagagtacttaaagatattgtt
aataatcataaattaataataaatgagccagaaccatttataggagtagtagaacatgga
gataatgctgttaaatttgcaactagagtttggtgcaagacagaagattattggacaatt
tatcttgatttactagaagaggttaaagttaggtttgacgaagaaggaattacgattcca
tatcctaaaatggatttaacagtaaaagaattaaacaaaatttaa
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