Clostridioides difficile R20291: CDR20291_1679
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Entry
CDR20291_1679 CDS
T00998
Symbol
truA2
Name
(GenBank) tRNA pseudouridine synthase 2
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
cdl
Clostridioides difficile R20291
Brite
KEGG Orthology (KO) [BR:
cdl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cdl03016
]
CDR20291_1679 (truA2)
Enzymes [BR:
cdl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CDR20291_1679 (truA2)
Transfer RNA biogenesis [BR:
cdl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CDR20291_1679 (truA2)
Prokaryotic type
CDR20291_1679 (truA2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
CBE04418
UniProt:
A0A9R0CEJ6
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All DBs
Position
1970597..1971334
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AA seq
245 aa
AA seq
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MRNIKMIVAYDGSRYKGYQKLGDNNMTIQEKLENVLSKMTNETVEIIGSGRTDMGAHARG
QVVNFRTNCMDSLDKIQKYLYEYLPEDIVVKTVEEVDERFHSRYNVKSKTYMYKIDNNKY
HNPFIRKYATHVSKKLDLDRMRKASEYLVGEHDFTSFASSKSKKKSNVREIYSINIKEDD
NVIEIYVEGNGFLYNMVRIIVGALIDVGLKRRAPQDIKYMLESKDRCQSSDTAPAKGLCL
WKVTY
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgagaaacataaaaatgatagtagcatacgatggttcaagatataaaggatatcaaaaa
ttaggtgacaataatatgactattcaagaaaaacttgaaaatgttttaagtaaaatgact
aatgaaacagtggagataatagggtctggaagaactgatatgggagctcatgcaagagga
caagtggtaaattttagaactaattgtatggattctttggataaaattcaaaaatattta
tatgaatatttaccagaagatatagttgtaaaaactgttgaagaagttgatgaaagattt
cattcaagatacaatgtaaaatcaaagacttatatgtataaaattgacaataataagtat
cacaatccttttataagaaaatatgctactcatgtaagtaaaaaattagatttagataga
atgagaaaagcaagtgagtatttagtaggagaacatgattttactagttttgcttcttct
aaatctaagaaaaaatcaaatgtaagagaaatttattctataaatataaaagaagatgat
aatgttatagaaatatatgtagaaggaaatggatttttgtacaacatggtaaggataata
gtaggtgctttgatagatgttggtctaaaaagaagagctccacaagatattaagtatatg
cttgaatcaaaagatagatgtcaatcatcagatactgcaccagctaaaggactatgtctt
tggaaagtaacatattag
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