Clostridioides difficile R20291: CDR20291_1703
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Entry
CDR20291_1703 CDS
T00998
Name
(GenBank) putative pyridoxal-dependent decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
cdl
Clostridioides difficile R20291
Pathway
cdl00300
Lysine biosynthesis
cdl00470
D-Amino acid metabolism
cdl01100
Metabolic pathways
cdl01110
Biosynthesis of secondary metabolites
cdl01120
Microbial metabolism in diverse environments
cdl01230
Biosynthesis of amino acids
Module
cdl_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
cdl00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CDR20291_1703
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CDR20291_1703
Enzymes [BR:
cdl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
CDR20291_1703
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
CBE04462
UniProt:
A0A9R0BKI9
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All DBs
Position
1996055..1997299
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AA seq
414 aa
AA seq
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MIIFKILEVKNMYSNEDYKFIEENAPCYIYDETNIIEKCKELKNNILGFDFLYSIKTNPY
NKIVKSIAEQGFGADASSTNEVMISSECGVSKYDIYYSSPGKTEIDIETVLDKCIIIADS
ITEIELINKISKKHNQKVKIGIRINPDFTMDDDSAKSSKFGIDIEDMSSVFKMLSMCDYV
SVVGIHIHIKSQVLDFEKLGHYYEKCFFIALNLNKSKYINIEFINFGSGLGVAYDNLREN
PLNLKELSKLTQKIVFTNSNTLKSRLLIESGRFIVCKSGNYYVKIVDIKVSRGKKYLIVK
NGLNGFMRPIISNLIENITCGVELEGQEPLYTSNHAFSLSVLNNLKEEEYVNVVGNLCTS
LDVIANNVKLKKANIGDLISISNAGSYSYSLSPLLFSSYEFPKQYYKRKDGYIE
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgattatatttaaaatcttggaggtaaaaaatatgtactcaaatgaagactataaattt
atagaagaaaatgcaccatgttatatatatgatgagactaatataattgaaaaatgtaag
gaattgaaaaataatattttaggttttgattttttatattctataaaaacaaatccatat
aacaaaattgtaaaaagcattgcagagcaaggttttggagcagatgcttcttcaactaat
gaagttatgatttcatcagaatgtggagtttctaaatatgatatttattattcatcacca
ggcaaaacagagattgatatagaaactgttttagataaatgcataattattgcagatagt
attacagaaatagaacttataaataagatatctaaaaagcataatcagaaagttaaaata
ggaataagaataaatcctgattttactatggatgatgatagtgctaaatcaagcaaattt
ggtatagatatagaagatatgagcagtgtttttaagatgttaagtatgtgtgattatgta
tctgtagttgggattcatatacatattaaatctcaggtattggattttgaaaagttagga
cattattatgaaaaatgtttttttatagctttaaatttaaataaaagtaagtatattaat
attgaatttataaattttggtagtggacttggagtagcttatgataatcttagagaaaat
ccacttaatcttaaagagctttcaaaattaactcaaaagattgtttttactaattcaaac
acactgaaatcaagacttcttattgaatcaggacgtttcatagtttgtaaatcaggtaat
tattatgttaaaattgtagatattaaagtatcaagagggaaaaaatatcttattgtaaaa
aatggacttaatggatttatgagacctattatttctaatttaattgaaaatattacttgt
ggagtagaattagaaggtcaagagccattatatacatcaaatcatgccttttctctttca
gtattaaataatttaaaagaagaagagtatgtaaatgttgttgggaatctctgtacatca
ttagatgtaattgcaaataatgttaaattgaaaaaagcaaatataggagatttgatttca
attagtaatgctggaagttactcctattctttatcaccactattattttcgagttatgaa
tttcctaaacaatattataaaagaaaagatggatatattgagtaa
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