Clostridioides difficile R20291: CDR20291_1819
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Entry
CDR20291_1819 CDS
T00998
Name
(GenBank) putative phage-related deoxycytidylate deaminase (putative late competence protein)
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
cdl
Clostridioides difficile R20291
Pathway
cdl00240
Pyrimidine metabolism
cdl01100
Metabolic pathways
cdl01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
cdl00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
CDR20291_1819
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
cdl02044
]
CDR20291_1819
Enzymes [BR:
cdl01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
CDR20291_1819
Secretion system [BR:
cdl02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
CDR20291_1819
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
APOBEC_N
Bd3614-deam
SNAD4
Inv-AAD
Motif
Other DBs
NCBI-ProteinID:
CBE04662
UniProt:
A0A9R0CEN3
LinkDB
All DBs
Position
complement(2135885..2136337)
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AA seq
150 aa
AA seq
DB search
MEVYDLNKKLENRCSWQEYFMRLCETVAERGTCDRAYVGAIIVNSENRIVSTGYNGSISG
DKHCSEVGHEMRDGHCIRTIHAEQNALYYCAKEGISVKDCSIYVTHFPCLNCTKAIIQAG
IKHIYYRTGYRIDEYAIKLLQSSNVLYTKL
NT seq
453 nt
NT seq
+upstream
nt +downstream
nt
ttggaggtatatgatttgaataaaaaacttgaaaatagatgctcatggcaagaatatttt
atgagactgtgcgaaacagtagctgaaagaggaacttgtgatagagcttatgtaggagct
ataattgtcaattcagaaaacagaatagtgtctactggatataatggtagtatttctgga
gataagcattgtagtgaagttggtcatgaaatgagagatggacattgtattagaaccatt
cacgctgaacaaaatgccctttattattgtgcaaaagaaggtatttcagttaaagattgc
tctatttatgtaactcactttccttgcttaaattgtactaaggctataattcaagctgga
attaaacatatatattatagaactggatatagaatagatgaatatgctataaaattattg
caatcaagtaatgtcttatatacaaaattataa
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