Clostridioides difficile R20291: CDR20291_1875
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Entry
CDR20291_1875 CDS
T00998
Name
(GenBank) LysR-family transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
cdl
Clostridioides difficile R20291
Brite
KEGG Orthology (KO) [BR:
cdl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cdl03000
]
CDR20291_1875
Transcription factors [BR:
cdl03000
]
Prokaryotic type
Helix-turn-helix
LysR family
CDR20291_1875
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
HTH_5
MarR_2
Motif
Other DBs
NCBI-ProteinID:
CBE04762
UniProt:
A0A9R0BKV1
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Position
complement(2188748..2189635)
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AA seq
295 aa
AA seq
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MNIKLELYKVFNAVVNNKSFSLAAKELFMSQPAVSQSIKQLEEQLDTLLFYRNNKGVKLT
PEGKILSEHVTTALKLISSGEDRINKFKKLEYGSLKIGVGDTAARFFLLKYLEIFHKKYP
HIHVSTINRTSRELISLLKDGNIDIAIINMPIEDDTLNIVECIEIHDIFVCANDYIEYKG
RKISLEELNTLPLIMLENKANSRLYVNEYFLSKGIKLNPDIELGSHELLLEFAYINLGVS
CVIEEFSIDYLENEKLFKLDIKEPIPKRNIGYCHLKDISLSLATKEFLSMISNNI
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgaatataaaacttgaactttataaggtttttaatgcagttgtaaataataagagtttt
tctcttgctgctaaggaattgtttatgtcacagccagctgtaagccagtcaataaagcaa
ttagaagaacaattagatactttattattttatagaaacaataagggagtaaaattaact
ccagaggggaaaattctaagtgaacatgtcactactgcattaaagttgatatcatcagga
gaagatagaataaataaatttaaaaaattagaatacggttctctgaaaataggagtagga
gatacagctgcacgttttttcttgttaaaatatttagaaatttttcataagaagtatcca
catatacatgtatctacaataaatagaacgagtagagaacttatatctttactcaaagat
gggaatatagatatagcaattataaacatgccaatagaagatgatacactaaatattgtt
gagtgtattgaaatacatgatatatttgtatgtgcaaatgattacatagaatacaaaggt
aggaaaatatcattggaagaattaaacacattgcctttaataatgctagaaaataaagca
aattcaagactttatgtaaatgaatattttttatcaaaaggtataaaactaaacccggat
atagaattgggttctcatgaattacttttagaatttgcgtatataaatcttggagtgtct
tgtgttatagaagaatttagcatagattatttggaaaatgagaaattgtttaaattagat
ataaaagagccaatacctaagagaaatataggttactgccatttaaaagatatatcttta
tccttagcaaccaaagaatttttaagcatgatatctaataacatataa
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