Clostridioides difficile R20291: CDR20291_1910
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Entry
CDR20291_1910 CDS
T00998
Name
(GenBank) putative radical sam protein
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
cdl
Clostridioides difficile R20291
Brite
KEGG Orthology (KO) [BR:
cdl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cdl03016
]
CDR20291_1910
Enzymes [BR:
cdl01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
CDR20291_1910
Transfer RNA biogenesis [BR:
cdl03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
CDR20291_1910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
CBE04822
UniProt:
A0A9R0BKV4
LinkDB
All DBs
Position
complement(2230236..2231525)
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AA seq
429 aa
AA seq
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MNEHDSEKLCSMLEEMGYQMSMMVEESDLIIYNTCAVRENAELKVYGNLGQLKHLKGKNP
DMKIAVCGCMMQQPHVVEELRKKYKHVDLIFGTHNLYKFPQLLTESINSDKMLVDVWDVD
GEVIEGLRSNRKFELKAFVNIMYGCNNFCTYCIVPYTRGRERSRTPEDIINEIKELVANG
TKEITLLGQNVDSYGKTLENPVSFSELLRKVNDIEGIERVRFMTSHPKDISDEVIYAIRD
CDKVCEFLHLPIQCGSSSLLKKMNRHYTKEYYLEIIEKAKKEVPGIAFSTDLMIGFPGET
EEDLLDTLDVVEKVRYDSAFTFIYSKRQGTPAAKMENQIPEDIKHDRFNRVLEAVNRISA
EINDGYKDRIVEVLVEGRSKNNENKFAGRTRQNKLVNFEGGNDDLIGKLVMVKITEPRTF
SLNGILVNN
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaacatgattcagaaaaattatgttcgatgttagaagagatgggataccaaatg
tcaatgatggttgaagaaagtgatttaataatatataacacctgtgcagttagagaaaat
gcagagctaaaagtgtatggtaacttaggacaattaaaacatctaaaaggaaaaaatcca
gatatgaaaatagctgtatgtggatgtatgatgcaacaaccacatgttgtagaggaatta
agaaaaaaatataaacatgtagaccttatatttggaacacataatctatataaatttccg
caattacttacagaatcaataaattctgacaaaatgttagtggatgtatgggatgtggat
ggagaagtaatagaaggtcttagaagtaatagaaaatttgaattaaaagcatttgtaaat
ataatgtatggatgcaataatttctgcacatattgtatagtcccatacacaagaggaaga
gaaagaagtagaactcctgaagatataattaacgagataaaagagcttgttgcaaatgga
acgaaagaaatcactttacttggacaaaatgtagattcttatggtaagacacttgaaaat
ccagtttcattctcagaacttttaagaaaagtgaatgatatagaaggaattgaaagggtt
cgatttatgacatctcatccaaaagatatatctgatgaagtaatatacgcaattagagat
tgtgataaggtgtgtgagtttttacatctaccaatacaatgtggaagcagtagccttttg
aaaaaaatgaatagacattatacaaaggaatattatttagaaataatagaaaaagctaaa
aaggaagttccaggtattgctttttctacagacttaatgattggtttcccaggagaaaca
gaagaagatttattggacactttagatgtggttgaaaaagttagatatgattcagctttt
acatttatttattctaaaagacagggaactcctgctgctaaaatggaaaatcaaatacca
gaagatataaagcatgatagatttaatagggtgttagaagctgtaaataggatttctgca
gaaataaatgatggatataaagatagaatagttgaagttctagttgaaggaagaagtaaa
aataatgaaaataagtttgctggtagaactagacaaaataaactcgtaaatttcgaaggt
ggaaatgatgatttaattggtaaattagttatggtcaaaattactgaacctagaactttt
tcattaaatgggatattagtaaataattaa
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