Clostridioides difficile R20291: CDR20291_1933
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Entry
CDR20291_1933 CDS
T00998
Symbol
clpB
Name
(GenBank) chaperone
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
cdl
Clostridioides difficile R20291
Brite
KEGG Orthology (KO) [BR:
cdl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
cdl03110
]
CDR20291_1933 (clpB)
Chaperones and folding catalysts [BR:
cdl03110
]
Heat shock proteins
HSP100
CDR20291_1933 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_16
AAA_22
AAA_14
Sigma54_activat
nSTAND3
IstB_IS21
ATPase_2
TniB
NACHT
AAA_7
AAA_18
RuvB_N
RNA_helicase
Roc
AAA_24
Zeta_toxin
NBD_SMAX1
bpMoxR
ABC_tran
Torsin
T2SSE
AAA_25
Cep57_CLD_2
ResIII
AAA_19
Cob_adeno_trans
ATG14
DUF7194
Motif
Other DBs
NCBI-ProteinID:
CBE04864
UniProt:
A0A9R0CEQ9
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All DBs
Position
complement(2258208..2260802)
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AA seq
864 aa
AA seq
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MDVEKMTLRVQKSLNEAYNEAVKNHNQQVDVIHLFSALINQEDGLIPNIIEKMNISIDSL
RNTVNFEIDKLPKVYGEGADSQGVSATRKINEVLIKAESISKEFKDSYISVEHVMLAMME
TESKSAVGKILKQYNINKNDFLNILSQVRGSQRVETQDPEGTYDALARYGTNLVDLAKKN
KLDPVIGRDEEIRRIIRILSRRTKNNPVLIGEPGVGKTAIVEGLAERIVRGDVPEGLKDK
IVFSLDMGALIAGAKYRGEFEERLKAVLKEVQSSDGKIILFIDEIHTIVGAGKTEGSMDA
GNLIKPMLARGELNCIGATTFDEYRKYIEKDKALERRFQPVIAEEPTVEDTISILRGLKE
RFEIHHGVRIHDNAIVAAAKLSHRYIQDRFLPDKAIDLIDEAGAMIRSEIDSLPTELDVV
RRKLFTLETEREALLKENDDKSKSRLDDIQKEIAELKSKNDEMTAKYEKEKSQILDIKNL
KAQLDEAKGKAEKYEREYDFNKAAEVKYGEIPKLEEQIKQYEENMNDGSENSLLKEEVTE
EEISSIVSKWTGIPVTKLVEGEREKLLKLEDELHKRVIGQDEAVTAVSNAVIRARAGLKD
ERKPIGSFIFLGPTGVGKTELAKTLARNLFDSDDNIIRIDMSEYMEKHAVSRLVGPPPGY
VGYEEGGQLTEAVRRAPYSVILFDEIEKAHEDVFNMFLQILDDGRLTDNKGKTVDFKNTL
IIMTSNIGSNYLLEAGGNITETTNNLVMNEMKHRFKPEFLNRVDDIIMFKPLDQENIKKI
IDIFMKDLKNRLKEKDITIEVTNSAKDVMVREGYDPVYGARPLKRYIGNTLETIIAKKLI
AGDVYNGCTIVIDGKDENIEVLVK
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atggacgtagaaaaaatgactttaagagttcaaaaaagtttaaatgaggcttataacgaa
gcagtaaaaaatcataaccaacaagtagatgtaattcatcttttctcagcacttattaat
caagaggatggattgataccaaatataatcgaaaaaatgaatatatcaattgattctttg
agaaatactgtaaactttgaaattgataagcttccaaaagtatatggagaaggtgctgac
tcacaaggagtatcagctactagaaaaataaatgaggtgcttataaaggcagagagtatt
tctaaagaatttaaagattcatatataagtgtagagcatgttatgcttgcaatgatggaa
acagaatcaaaatcagctgttggtaaaatattaaaacaatataatataaataagaatgac
tttttaaatattttatcacaagtgagaggtagtcaaagagtagaaacacaagacccagaa
ggcacatatgatgcacttgctagatatggaacaaacttagtagatttagccaagaaaaat
aaattagaccctgtaattgggagagatgaagaaataagaaggattataagaattttatca
agaagaacaaaaaataatcctgtattgattggtgagccaggtgtaggtaaaactgcaatt
gtagaagggttagcagagagaatagtaagaggagatgtcccagaaggtttaaaagataag
attgtattctcacttgatatgggagctttaattgctggtgcaaaatatagaggtgaattt
gaagaaagattaaaggcagttttaaaagaagttcaaagttctgatggaaagattatactg
tttatagatgagattcatactatcgttggagctggtaaaacagaaggttcaatggatgca
ggtaatcttattaaacctatgcttgcaagaggtgaattgaactgtattggtgcaactact
tttgatgaatatagaaagtatatagaaaaagataaggctcttgaaagacgttttcagcct
gtaattgcagaagaacctactgttgaagacacaatatctatacttagaggtttaaaagaa
agatttgagatacatcatggagtaagaatacatgataatgctattgtagcagcagcaaaa
ctttctcatagatatatacaagatagatttttaccagataaagcaattgatttaattgat
gaagctggagctatgattcgtagtgaaatagattcattgccaacagaattagatgttgtt
agaagaaagttatttacattagaaactgaaagagaagcattacttaaagaaaatgatgat
aaaagcaaatcaagattggatgatattcaaaaagaaatagcagagttaaaatctaaaaat
gatgaaatgacagcaaaatatgaaaaagaaaagagtcaaatattagatattaaaaactta
aaggctcaattagacgaagctaaaggtaaagctgaaaagtatgaaagagaatatgatttc
aacaaagcagcagaggttaaatatggtgaaatacctaagttagaagaacaaataaagcag
tacgaagaaaatatgaatgatggttctgaaaattctcttttaaaagaagaagttactgaa
gaagaaatatctagcattgtatcaaagtggacaggtataccagtaactaaactagttgaa
ggagaaagagaaaaattacttaaactagaagatgaacttcataaaagagttattggacaa
gatgaagcagttacagcagtttcaaatgcagtaatacgtgcaagagcaggattaaaagat
gaaagaaaaccaattggttcatttattttcttaggccctacaggtgttggtaaaactgaa
cttgcaaaaactcttgctagaaatttattcgatagtgacgataatataataagaatagat
atgtctgaatacatggaaaaacatgctgtatcaagactagttggacctcctccagggtac
gtgggatatgaagagggtggtcaacttacagaagcagttagacgtgctccttattctgta
atactatttgatgagatagaaaaagcacatgaggatgtatttaacatgttcttacagata
ttagatgatggtagacttactgataataaaggtaagacagtagactttaaaaatactctt
ataataatgacttctaatataggaagtaattatctattagaagcaggaggaaatataaca
gagactactaacaatttagtaatgaatgaaatgaagcatagatttaaacctgagttttta
aacagagtagatgatattataatgtttaagcctttagaccaagaaaatatcaagaaaatt
atagatatatttatgaaagatttaaaaaatagattaaaagaaaaagatattactattgaa
gttacaaattcagcaaaagatgttatggtgagagaaggatatgaccctgtatatggagca
agacctcttaagagatatataggaaatacattagaaactataattgcaaagaaacttatt
gctggagatgtgtataatggatgtactatagttatagatggaaaagatgaaaatattgaa
gttttagttaaataa
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