KEGG   Clostridioides difficile R20291: CDR20291_1960
Entry
CDR20291_1960     CDS       T00998                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
cdl  Clostridioides difficile R20291
Pathway
cdl00300  Lysine biosynthesis
cdl00470  D-Amino acid metabolism
cdl01100  Metabolic pathways
cdl01110  Biosynthesis of secondary metabolites
cdl01120  Microbial metabolism in diverse environments
cdl01230  Biosynthesis of amino acids
Module
cdl_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:cdl00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    CDR20291_1960 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    CDR20291_1960 (lysA)
Enzymes [BR:cdl01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     CDR20291_1960 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC DUF2101 Ribosomal_L12_N
Other DBs
NCBI-ProteinID: CBE04911
UniProt: A0A9R0BL12
LinkDB
Position
complement(2287180..2288472)
AA seq 430 aa
MKLHGTMTVNNDELYIGGVSCLELSKKYQTPLYVFDEALVRQNCREYIEYFKAREGKNKV
AYAGKAFLPLYMCNLINEEQMCLDVVSGGELYTAYKSNFPMEKVFFHGNNKTKEEINMGL
DLGVGKFVVDNFYELDLLEALCEDKGKTQEIYFRITPGIEAHTHDYIKTGQIDSKFGFAL
VNGDLFRAIEKLSEYKNIKLVGLHAHIGSQIFDVEPYIDTVDIMMNLVKEIKEKFNIQLT
EIDLGGGVGVYYSEGDKPKTIKEFCETIITKAETSCKELGIEVPTLVIEPGRSIVANAGS
TLYTVGSIKDIKDVRVYVSVDGGMTDNVRPSLYQASYECSIVNKINHEAMNHVTIAGKCC
ESGDILIGDINIMDIKSGDILITTSTGAYGYSMSSNYNKIPRAAVVSVFDGNDKIICKRQ
SYEDLLALEI
NT seq 1293 nt   +upstreamnt  +downstreamnt
atgaaacttcatggaactatgactgtaaataatgatgaattatatattggaggagtgagt
tgtttagaacttagtaaaaaatatcaaactccactttatgtatttgatgaagctttagtt
agacaaaattgtagagaatatatagaatattttaaggctagagagggaaaaaataaggtt
gcttatgcagggaaagcttttttacctctttacatgtgtaatcttataaatgaagaacaa
atgtgtttagatgtagtttcaggaggcgagttatatacagcttataaatcaaattttcct
atggaaaaagttttctttcatggaaacaataagactaaagaagaaataaacatgggatta
gatttaggtgtaggtaaatttgtagtggataatttttatgaattagatttgcttgaagca
ttatgtgaagataaaggtaaaactcaagagatatactttagaataactcctggtatagaa
gctcatacacatgattatataaaaactggacagatagattctaaatttggatttgcttta
gtaaatggagatttatttagagcaatagaaaaattaagtgaatataaaaatattaaactt
gtaggtcttcacgctcatataggttcacaaatatttgatgtagaaccatacatagataca
gtggatataatgatgaacttggtaaaagaaataaaagaaaaattcaacatacaactaaca
gaaattgacttaggtggaggagttggcgtttattatagcgaaggagataaacctaaaact
ataaaagagttttgtgaaaccataatcactaaagcagaaacttcatgtaaagagcttgga
atagaagtacctacattggtaatagaaccaggaagatcaatagttgcaaatgcaggaagt
acattgtatacagtaggttctataaaagatataaaagatgttagggtttatgtaagtgta
gatggaggtatgacagataatgtaagaccttcgttgtaccaagctagttatgagtgtagt
attgtgaataaaattaatcatgaggctatgaatcatgtaacaatagctggaaaatgttgt
gagagtggagatatattaattggagatataaacataatggatattaaaagtggagatata
cttataacaacatcaactggtgcatatggatattcaatgtcttcaaattataataaaata
ccaagagcagcagtagtatcagtatttgatggaaatgataagataatttgtaagagacaa
agctatgaggacttattagctttagagatataa

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