Clostridioides difficile R20291: CDR20291_2118
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Entry
CDR20291_2118 CDS
T00998
Name
(GenBank) ABC transporter, ATP-binding/permease protein
KO
K18887
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
cdl
Clostridioides difficile R20291
Pathway
cdl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cdl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CDR20291_2118
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cdl02000
]
CDR20291_2118
Transporters [BR:
cdl02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
CDR20291_2118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
AAA_29
AAA_15
Motif
Other DBs
NCBI-ProteinID:
CBE05189
UniProt:
A0A9R0BLF1
LinkDB
All DBs
Position
complement(2485120..2487366)
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AA seq
748 aa
AA seq
DB search
MFKLIKYLKKSALSIVIIVCLLVIQAVCDLSLPEYTSNIVNVGIQQGGVENSVPSVIRES
ELNKITLFMDKSSKDKVLDNYTLLNKKDYVKYKDKYPGLKDESLYELNTKDKDTIDDLNV
IFGKAILIVSGLEGDSKEVKAMKAQLMSKLPPQATQSGDVDIFKLLSAMPKEQLDTLTKE
MSKGFESMPESMITQSSVSYVRSEYEKIGIDTEKTQNNYILFTGAKMLGIAMISMVATIT
VGFLAARVAASVGRNLRSGVFRKVMSFSNTEMNEFSTASLITRSTNDIQQIQMLMVMLLR
IVFYAPIMAIGGVIKVLNTNTSMAWIIAVAVVAILSLIVVLFSVVMPKFKLVQKLVDKLN
LVSREIITGIPVIRAFSTEKHEEERFDKANKNLTKTNLFVNRVMTCMMPAMMLIMNLITV
LIVWRGAYSVDSGAMQVGDMMAFIQYTMQIIMSFLMISMVSIMLPRASVSATRIDEVLVS
DISIKDPEKSEAQEFKEDKKGLVEFKNVSFMYPDAEEPILTNISFTAKPGETTAFIGSTG
SGKSTLINLIPRFFDVTEGEILLGGVNIKNVSQHDLREKIGYVPQKGVLFSGTIESNLKY
GRKDATDEEMRTAAEIAQATEFIDSKPEAFKTEISQGGTNVSGGQKQRLSIARAIAKNPE
VYIFDDSFSALDLKTDAALRKALKSKTAESTVLIVAQRISTILNAEQIIVLNEGEIVGIG
THKELLKNCEVYEQIALSQLSKEELANE
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaattaattaaatatttaaagaaatcggcattatcaatagtaataatagtctgt
ctattggtaattcaagcggtatgtgacctttctttaccagaatacacatccaatatagta
aatgtaggtatacaacaaggtggagtagaaaactctgttccatctgtgattagagagagt
gaattaaataaaattactttatttatggataaaagtagtaaggataaagtactagataat
tatactttgctgaataaaaaggattatgttaagtataaagataagtacccaggtctaaaa
gatgaatctctttatgagttaaatactaaagacaaagacactatagatgatttaaatgtt
atttttggtaaagctattttaatagtatcagggcttgagggcgatagtaaagaggtaaaa
gctatgaaagctcagttaatgagtaaacttccaccacaagctactcaaagtggagatgtt
gatatatttaaattgttatcagcaatgccaaaggaacagttagatacattgactaaagag
atgagcaaaggctttgaaagtatgccagagagtatgataacacaaagctctgtttcatat
gtaaggtcagaatatgagaaaataggtattgatacagaaaaaactcaaaataattatata
ttatttactggtgctaaaatgcttggtatagcaatgattagtatggtagctacaataaca
gtaggatttttagcagcaagagtagcagcaagtgtaggtagaaatttaagaagtggagta
tttagaaaagttatgtcattttcaaatactgaaatgaatgaattttctacagcttcatta
attactcgtagtacaaatgatattcaacagatacaaatgttgatggttatgttgcttaga
atagtattctatgcacctataatggctataggtggagtgataaaggttttaaacacaaat
acttcaatggcctggattatagcagtagcagtagttgctatcttatcattaattgtagtg
ttattctcagtggttatgcctaagtttaaactggttcaaaagcttgttgataagttaaac
ttagtaagccgtgaaataattactggtattccagttatcagagcttttagtactgaaaaa
catgaagaagaaagatttgataaagcaaataaaaatttaactaaaacaaatctttttgta
aatagagttatgacatgtatgatgcctgctatgatgcttataatgaaccttatcacagtt
cttatagtttggagaggtgcatacagtgttgattctggagcaatgcaagttggagatatg
atggcatttatacaatatacaatgcaaataataatgtcattcttaatgatatcaatggta
tctattatgcttccaagagcatccgtttcagctacacgtatagatgaagtattagtgtca
gatataagcataaaagacccagaaaaatcagaggcacaagagtttaaggaagataaaaag
ggtcttgttgaatttaaaaatgtttcgttcatgtatccagacgcagaagaacctatatta
acaaatatatcttttacagcaaagccaggagaaacaactgcctttataggaagtactggt
agtggtaagtcaactcttataaatttaattcctcgtttctttgatgttactgaaggagaa
atattacttggtggagttaatataaaaaatgtttctcaacatgatttaagggaaaaaatt
ggatatgtacctcaaaagggagtattgttttctggtactatagaatccaacttaaaatat
ggtagaaaagacgcaacagatgaagaaatgagaacagcagctgaaatagctcaagctaca
gaatttatagattctaaaccagaagcttttaaaactgaaatttctcaaggtggaacaaat
gtatctggaggtcaaaaacaaagactttctattgcaagagcaatagcaaaaaatccagaa
gtttatatatttgatgatagtttttcagcacttgacttaaaaactgatgcagctcttcgt
aaggctttaaaatcaaaaactgctgaaagtacagttctaatagttgcacaaagaattagt
actatcttaaatgcagaacagataattgttttaaatgagggagaaatagttggaatagga
acacataaagagcttctaaaaaattgcgaagtttatgagcaaatagctttatcacaactt
tcaaaggaggagctagctaatgagtag
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