Clostridioides difficile R20291: CDR20291_2214
Help
Entry
CDR20291_2214 CDS
T00998
Symbol
gatC
Name
(GenBank) PTS system, galactitol-specific IIc component
KO
K02775
galactitol PTS system EIIC component
Organism
cdl
Clostridioides difficile R20291
Pathway
cdl00052
Galactose metabolism
cdl01100
Metabolic pathways
cdl02060
Phosphotransferase system (PTS)
Brite
KEGG Orthology (KO) [BR:
cdl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
CDR20291_2214 (gatC)
09130 Environmental Information Processing
09131 Membrane transport
02060 Phosphotransferase system (PTS)
CDR20291_2214 (gatC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cdl02000
]
CDR20291_2214 (gatC)
Transporters [BR:
cdl02000
]
Phosphotransferase system (PTS)
Enzyme II [TC:
4.A
]
Galactitol-specific II component
CDR20291_2214 (gatC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EIIC-GAT
Motif
Other DBs
NCBI-ProteinID:
CBE05359
UniProt:
A0A9R0CF00
LinkDB
All DBs
Position
complement(2598301..2599575)
Genome browser
AA seq
424 aa
AA seq
DB search
MDKLLAVVQYILNMGPTVILPITIVVLGMIFRIKFTKALKSGLTIGIGFVGINLVVNLLT
STLGPAAQGMVERFGLNLTVIDVGWPTTASATWASPVAPILIPVCLLVNLLLLYFNKTKI
LNVDIWNYWHFIVAGAVGYIVTGSYVWAIFCAILMELLVLFIAEKTAKNVQEFYDLEGIA
LPTGSTASFAPLGYLVGKFVEKIPGINKIQADPDSIQKRFGIFGEPMMMGIILGIILGAL
AGYDVAGIFNVGISMGAVMLLMPRMVRILMEGLIPISESIRDFLQAKYGDRELYIGLDAA
VATGHPAVISTALILVPITLFLAVILPGNKVLPFGDLATIPFYMAFIVCFRKGNIVQSVI
TGTIVIAISLYMATNFADVHTQLLQQANMMPEGTTMVTSIDTGGNLLKWGILKLSQLVSS
FGIF
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggataaattattagcagtagtacaatacattttaaatatgggaccgacagtaatacta
ccaataacaattgtagtactaggaatgatatttagaattaagtttacaaaagctttaaag
tcaggtcttacaattggtataggatttgtgggtataaacttagttgtaaacctattaaca
tcaacactagggccagcggctcaaggaatggttgaaagattcggacttaatttaacagta
atagatgttggttggccaacaacagcatcagcaacatgggcttcaccagttgcaccaata
ttaataccagtttgtttattagtaaacttactattattatacttcaataaaacaaagata
ttaaacgttgatatatggaattattggcactttatagtagcaggtgcagttggatatata
gtaacaggaagttatgtttgggctatattctgtgcaatactaatggagttattagtactg
tttattgcagaaaagacagcaaaaaatgttcaggagttttatgatttagaaggtatagca
ttaccaactggttcaacagcttcatttgctccacttggatatttagtaggtaaatttgtt
gaaaaaataccaggaataaataaaatacaagcagacccagactctatacaaaaaagattt
ggtatatttggagaaccaatgatgatggggattatactaggtataatacttggagcactt
gcgggatatgatgtagcaggaatattcaatgtaggtatatcaatgggtgcagtaatgtta
cttatgcctagaatggttagaatattaatggaaggtttaattccaatttcagaatcaata
agagatttcttacaagcaaaatatggagacagagaactttatataggtctggatgcagca
gtagcaacgggacatccagcagttatatcaacagctcttatacttgttcctataacgttg
ttcttagcagttatactaccaggaaacaaagttttaccatttggagacttagcgacaata
ccattttatatggcatttatagtgtgctttagaaaaggtaatatagttcaatcagttata
acaggaacaatagtaatagctatatcactttatatggctacaaactttgcagatgttcat
acacaattattacaacaagcaaatatgatgccagaaggaacaacaatggttacaagtata
gatacaggtggaaacttgctaaaatggggaatattgaaattatctcaattagtttcttca
tttggaatattctaa
DBGET
integrated database retrieval system
