Clostridioides difficile R20291: CDR20291_2284
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Entry
CDR20291_2284 CDS
T00998
Name
(GenBank) putative DNA polymerase III, epsilon chain
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cdl
Clostridioides difficile R20291
Pathway
cdl03030
DNA replication
cdl03430
Mismatch repair
cdl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cdl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CDR20291_2284
03430 Mismatch repair
CDR20291_2284
03440 Homologous recombination
CDR20291_2284
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cdl03032
]
CDR20291_2284
03400 DNA repair and recombination proteins [BR:
cdl03400
]
CDR20291_2284
Enzymes [BR:
cdl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CDR20291_2284
DNA replication proteins [BR:
cdl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CDR20291_2284
DNA repair and recombination proteins [BR:
cdl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CDR20291_2284
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
RNase_H_2
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
CBE05485
UniProt:
A0A9R0CF61
LinkDB
All DBs
Position
complement(2678267..2678773)
Genome browser
AA seq
168 aa
AA seq
DB search
MKEYVVVDLETTGLDPYKGCEIIEIGITEIKNEQIVKNYSRLIKPKGIISSFITELTHIS
NEMVENEEPLELVLPRFRKYIGDRTIIAHNAKFDLKFLNYYLRMLDLEPINNYICTVELL
KKCKSYKGKNKKLETACAYYNIENINAHRADSDTLATAKLFLKIKDEY
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaatatgtagttgtggatttagaaactacaggattagatccatataaaggttgt
gaaataatagaaataggaataacagaaataaaaaatgaacaaattgtaaaaaactattca
aggttgataaaacctaaggggataatttcttcatttataacagaattgacacatataagt
aatgaaatggtagaaaatgaagaaccactagaattagttttacctagatttagaaaatac
ataggtgatagaactataattgcacacaatgcgaaatttgatttaaaatttttaaattac
tatcttaggatgttagatttagaaccaataaacaattatatatgtacagtagaattatta
aaaaaatgtaaaagttataaaggaaaaaacaagaaacttgaaacagcttgtgcttattac
aacatagagaatataaatgctcatagagctgacagtgatacattagcaactgcaaaacta
tttttgaaaataaaagatgaatattaa
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