Clostridioides difficile R20291: CDR20291_2388
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Entry
CDR20291_2388 CDS
T00998
Symbol
selD
Name
(GenBank) selenide,water dikinase
KO
K01008
selenide, water dikinase [EC:
2.7.9.3
]
Organism
cdl
Clostridioides difficile R20291
Pathway
cdl00450
Selenocompound metabolism
cdl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cdl00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
CDR20291_2388 (selD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cdl03016
]
CDR20291_2388 (selD)
Enzymes [BR:
cdl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.9 Phosphotransferases with paired acceptors
2.7.9.3 selenide, water dikinase
CDR20291_2388 (selD)
Transfer RNA biogenesis [BR:
cdl03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
CDR20291_2388 (selD)
Prokaryotic type
CDR20291_2388 (selD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AIRS
AIRS_C
Motif
Other DBs
NCBI-ProteinID:
CBE05673
UniProt:
A0A9R0BLW6
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All DBs
Position
complement(2796123..2797073)
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AA seq
316 aa
AA seq
DB search
MPKNDNIENLLVGLDTADDAAVYKLNDDMALIQTLDFFTPMVDNPYVFGQIAASNSLSDV
YAMGGKPLVAMNIVCFPSCHDMDVLAEILKGGFDKVKESGALLVGGHTVDDKEPKYGLSV
SGIVSPNKVLSNATAKPGDKLIITKPIGVGVLNTAMKEGMVEQHIADKVIEIMIHLNKYA
AMSFEKFDVNSVTDITGFGLLGHTLEMAKASEVSIEIESKHVPIIEGAIEMAQMGIIPAG
MYKNMHYVSKDVEVVGNIEVAVQDILYDPQTSGGLLISVKEELAEELVKDMKLNGAIEAK
IIGSVVPKGEKYITVL
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
ttgcctaaaaatgataatatagaaaatttattagtaggactagatacagcagatgatgct
gcagtttataaattaaatgatgatatggcacttatccaaactttagacttctttacacca
atggtagataacccatacgtatttggtcaaattgctgcatcaaattcactatcagatgta
tatgctatgggaggcaaacctttggttgctatgaatattgtttgttttccatcatgccat
gatatggatgtacttgcggaaatattaaaaggtgggtttgataaagtgaaagaaagtgga
gcacttttggttggagggcatactgtagatgacaaagagcctaaatatggtctttcagtt
tctgggattgtaagtccaaataaagttttatcaaatgctactgcaaaacctggtgataag
ttaattataacaaaaccaattggagtgggtgtattaaatacagccatgaaagaaggtatg
gtagaacaacatatagcagataaagtaatagaaataatgatacatttaaataaatatgca
gcaatgagttttgagaaatttgatgtaaattcggttacagatataactggttttggtcta
cttggtcatactttagaaatggccaaagcttctgaagtaagtattgaaattgaatcaaaa
catgtaccaattattgaaggtgcaatagaaatggcacaaatgggaattatacctgctggt
atgtataaaaatatgcattatgtatctaaagatgtagaagttgtaggaaatatagaagtt
gcagttcaagatattttatacgacccacaaacatcaggagggttgttaatttcagtaaaa
gaagaacttgcagaggaacttgtaaaagatatgaaattaaatggagcaatagaagctaaa
attataggttctgtagttccaaaaggggaaaaatatattacagttttataa
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