Clostridioides difficile R20291: CDR20291_2426
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Entry
CDR20291_2426 CDS
T00998
Symbol
elaC
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
cdl
Clostridioides difficile R20291
Brite
KEGG Orthology (KO) [BR:
cdl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cdl03016
]
CDR20291_2426 (elaC)
Enzymes [BR:
cdl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
CDR20291_2426 (elaC)
Transfer RNA biogenesis [BR:
cdl03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
CDR20291_2426 (elaC)
Prokaryotic type
CDR20291_2426 (elaC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B
Lactamase_B_3
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
CBE05740
UniProt:
A0A9R0BLV3
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All DBs
Position
2843246..2844163
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AA seq
305 aa
AA seq
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MIDLTLLGCGGNVPMPNRFLSSVFINYKGRKILIDCGEGTQVSMKLKKCGFKDIDLICIT
HLHGDHIFGLLGLLSTIGNSGRTSDLTIVGPVGIVDCIRSMRNLVEYVPYTLKIIENPQG
NFSLDNKVLRNLEISTISLEHSIECLGYSFNFRRNPKFDIDKATKNEVPKILWNKLQEGQ
NIVLNSKQYTPDMVLGELRKGVKISLTTDTRPIESIPDFIKDSDLFICEAMYGDDLDISK
AVRNKHMTFREAANLAKLGNVKQLLLTHFSPSLDIPSMYLENATNVFENTILGEDRLSLR
LNFDE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgatagatttaactttacttggatgtggtggaaatgtacctatgccaaacagatttcta
tcctctgtatttataaactataaaggtagaaaaatactaattgactgtggtgaaggtact
caggtatctatgaagctaaaaaaatgtggctttaaagatatagacttgatttgtataacc
catttacatggtgaccatatatttggacttttaggacttttatcaacaattgggaatagt
ggtcgtacaagtgatttaactatagttggtccagttggaatagtcgattgtatacgttct
atgagaaatttagtagaatatgtaccatacactttaaaaattatagaaaaccctcaaggc
aatttttctttagataataaagttttaagaaatttagaaatttcaacaatcagtttagaa
cactctatagagtgtttaggatacagttttaattttagaagaaaccctaaatttgatata
gataaggcaactaaaaacgaagttcctaaaatattatggaacaaactccaagaaggtcaa
aatatagttttaaattcaaaacaatacactccagatatggtcttaggagaattgagaaag
ggagttaagataagtcttacaaccgatacaagacctatagaatcaataccagatttcata
aaagatagtgatttatttatatgtgaagccatgtatggtgatgatttagatatatcaaaa
gctgttagaaacaaacatatgacttttagagaagctgctaatcttgcaaaacttggaaat
gtcaaacaacttttactgacccattttagtccttctttagacatacctagtatgtattta
gaaaatgctactaatgtttttgaaaatactattcttggagaagatagattaagcttgcgt
ttaaattttgatgaataa
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