Clostridioides difficile R20291: CDR20291_2490
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Entry
CDR20291_2490 CDS
T00998
Name
(GenBank) putative response regulator
KO
K07707
two-component system, LytTR family, response regulator AgrA
Organism
cdl
Clostridioides difficile R20291
Pathway
cdl02020
Two-component system
cdl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cdl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CDR20291_2490
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CDR20291_2490
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
cdl02022
]
CDR20291_2490
Two-component system [BR:
cdl02022
]
LytTR family
AgrC-AgrA (exoprotein synthesis)
CDR20291_2490
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LytTR
Response_reg
Motif
Other DBs
NCBI-ProteinID:
CBE05855
UniProt:
A0A9R0BLY1
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All DBs
Position
2918789..2919535
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AA seq
248 aa
AA seq
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MDILIFDNDVCFGIKLKEKINNILIKEGFDNDVIRLYYNANLLLKELTEKNKVKIYFIVV
DAKYKISNELCDGLWIAQKIRESDYISPIIFLTNHIEMILGIFDYRLEVMDFILKHDMEI
AESKIKACIKIAHKRYVKEKNYRSNFFTIYSDSSLWKISFDEVIYFETSAIPHKIKLVTT
SRIFEFYKSLRSLSDLDACFIRVHKSFVVNKYHIVSLDLKKNNIKMSNGHICRISNTYRN
ILKNIIKT
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
gtggatatattaatttttgataatgatgtttgttttggaataaaactaaaagaaaaaata
aataatattttaataaaagaaggttttgataacgatgttataagattatattataatgca
aatttgttattaaaagaacttactgaaaaaaataaagtaaaaatatattttatagttgta
gatgcaaaatacaagataagtaatgaattatgtgatggattatggatagcacaaaaaatt
agagaatcagattatattagtccaatcatatttcttacaaatcatatagaaatgatttta
gggatcttcgattataggttagaagttatggactttatattaaaacatgatatggaaatt
gctgaaagtaaaataaaagcttgtattaaaattgctcataaaagatacgttaaagaaaaa
aattatcgctctaatttttttactatctactcagattcctcactatggaaaatttcattt
gatgaagttatatattttgaaacaagcgctattccacataaaataaaattagtgactact
tcaagaatatttgaattctataaaagtttaaggtctttatcagatttagatgcatgcttt
attcgtgtacataaatcttttgtagttaataaatatcatattgtttctctcgacctaaag
aaaaataatattaaaatgagtaatggccatatatgtcgtatatctaatacatatagaaat
attttaaagaacattattaaaacataa
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