KEGG   Clostridioides difficile R20291: CDR20291_2813
Entry
CDR20291_2813     CDS       T00998                                 
Name
(GenBank) conserved hypothetical protein
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
cdl  Clostridioides difficile R20291
Brite
KEGG Orthology (KO) [BR:cdl00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:cdl02048]
    CDR20291_2813
Enzymes [BR:cdl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CDR20291_2813
Prokaryotic defense system [BR:cdl02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    CDR20291_2813
SSDB
Motif
Pfam: Cas3-like_C_2 DEAD Helicase_C Cas3_HD ResIII AAA_19
Other DBs
NCBI-ProteinID: CBE06410
UniProt: A0A9R0CFP9
LinkDB
Position
complement(3328774..3331095)
AA seq 773 aa
MLYAKSNPVETLREHTDELLKQMNVLRESYGKNINSLDFLEEEIFWQLLDFVIEFHDIGK
AFSPFQELIKSRMDTKINEPKIVTHLENNVGHNYLSPAFIDYSYIDRKKNKELRAVLNQV
IVYHHERDIFIDKDFKNLIQKILDEDLINKVYELQREFKVRYPIKTEKLSKVYLQSVEKR
IDKNHKYYNLYIMLKGILHRLDHSASAHEVVECNNVINIGEQTENYLMKEFGSLREAQSF
AKSNRNKNIILIASTGMGKTETALIWIDKDKAFFTLPLRVSINALFDRAKNIIGVGEAND
TFLGLLHSTAIDYLEESNQENSSEIVDLAKLLSCKLTFSTIDQIFKFPFLYRGYEKVYST
LAYSKVVIDEIQAYSPEIAAVLVKGIEMIHKIGGRFMIMTATMPTIYIDELKKRGVMNSN
LADLTCNTEKIRHCVSIVENSIDENLGKIIQSGMNKKVLVIVNTVKSAVEKYELIEEIVK
PKGIDVNLNLLHSMYIQEDRAKLEKYIKEFADSDSNGIWITTQLVEASLDIDFDELHTEN
STLDSLFQRFGRCYRSREYEENSPNIFIYTEKATGIGSIYDKDIVEKGLELLKTFINGKE
CVKMKEKYKVEMVKILYSKESLEGTAFEKRFTSALNILDTITPYSLGSKDAQNILRNIEG
YTVIPEDIYNKIEETLIKDYEELGQELINAYSNDDRQLINKIKSKRKKARREIIKKTVNL
PIYKAKQNVIDIQVKGLEDLKILLYKYDIHENKHTKQIFGKGVLISNEIDQFI
NT seq 2322 nt   +upstreamnt  +downstreamnt
atgttatatgctaaatctaatccagtggaaacacttagagaacatactgatgaactttta
aaacaaatgaatgtattaagagaaagttatggaaaaaatataaatagcttagattttcta
gaggaagagatattttggcaattacttgactttgttatagaatttcatgatattggaaaa
gcattttcaccgtttcaagagttaataaaaagcagaatggatactaaaataaatgaacct
aaaatagtaactcatttagaaaataatgtaggccataattatctttctcctgcatttatt
gattatagttatatagacaggaaaaaaaataaagaacttagagcagtattaaatcaagtt
attgtatatcatcatgaaagagatatctttatagataaagattttaaaaatttaatacaa
aaaatattagatgaagatttaataaataaagtttatgaactacagcgtgaatttaaagtt
agatatccaataaaaacagaaaaattgagtaaagtatatctacaaagtgtagaaaaaaga
atagataaaaatcacaagtactataatttatatattatgttaaaaggaatactacataga
ctagaccatagtgcttctgctcatgaagttgtggaatgcaataatgttataaatatagga
gaacagacagaaaattatttaatgaaagagtttggtagtttgagagaggctcaatcattt
gctaaatctaatagaaataagaatataatactgattgcatctacaggaatgggaaaaaca
gaaactgctttgatttggatagataaggataaagcattttttacactaccattaagagta
agtataaatgcattatttgatagggctaaaaatataattggagtaggagaagcaaatgat
acattcttaggtctgttacattcaacagcaatagattatttagaagaaagtaatcaggaa
aattcaagtgagattgtagatttagcaaagttattatcttgtaaactgacattttccaca
atagaccaaatatttaaatttccttttttgtatagaggctatgaaaaagtgtactcaaca
ttagcatattcaaaagtagtaatagatgagatacaagcatattcaccagaaatagcagct
gtattggtaaaaggtatagaaatgatacataagataggtggcagatttatgataatgaca
gctactatgccaaccatatatatagatgaattaaaaaaaagaggtgtaatgaatagtaac
ttagctgacttgacatgtaacacagaaaaaataagacattgtgtgtctattgtagaaaat
tcaatagatgaaaacttaggtaaaataatacaaagtggaatgaataaaaaagttcttgta
atagtaaatacagttaaaagtgctgtagaaaaatatgagttaatagaagaaatagttaaa
ccaaaaggaatagatgtcaacttaaatcttttacattctatgtatatacaagaagataga
gcaaaattagaaaaatatataaaagaatttgcagatagtgatagtaatggtatttggatt
actacacaattagtggaagcatcccttgatattgattttgatgagcttcatacagaaaat
tcaacacttgacagtctatttcaacgatttggtagatgttatagaagtcgtgagtatgaa
gaaaatagcccaaatatatttatatatacagaaaaagctacaggaataggtagtatttat
gataaggatattgtagaaaaaggacttgagctactgaaaacttttataaatggaaaagaa
tgtgtgaagatgaaagaaaaatataaggtagaaatggttaagatactatactctaaagaa
agtctagaaggtacagcttttgaaaagagatttaccagtgctttaaatattttagatact
ataacgccatatagtttaggttctaaagatgcacaaaatatacttagaaatattgaagga
tatacagtaattccagaggatatatataataaaattgaagaaactttaatcaaagattat
gaagagttgggacaagagcttataaatgcatatagtaatgatgatagacaattgataaat
aaaataaagtctaagagaaaaaaagcaagaagagagataattaaaaaaactgtaaattta
ccaatatataaagctaaacaaaatgtaattgacatacaggtgaaaggtcttgaagattta
aaaatacttttatataaatatgatatacacgaaaataagcatacaaaacagatatttggt
aaaggtgtgcttataagtaatgaaatagaccaatttatttga

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