Clostridioides difficile R20291: CDR20291_3060
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Entry
CDR20291_3060 CDS
T00998
Name
(GenBank) putative ABC transporter, permease protein
KO
K16906
fluoroquinolone transport system permease protein
Organism
cdl
Clostridioides difficile R20291
Pathway
cdl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cdl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CDR20291_3060
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cdl02000
]
CDR20291_3060
Transporters [BR:
cdl02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Fluoroquinolones transporter
CDR20291_3060
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane_3
FLQE3_permease
Motif
Other DBs
NCBI-ProteinID:
CBE06845
UniProt:
A0A9R0BN46
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All DBs
Position
complement(3655638..3656666)
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AA seq
342 aa
AA seq
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MYSKFFTLVKKDFWMMIYGKFFVLTLGSLILYSCYINFGYVKFMDEDSYHNNVYLYNPEN
ISMSASPLINQVSSIGELKAKLDEDTSAVCIDMSSSKPKVILHESIKGVDNYRADYALSL
LSSEKDHNSKISDNNAIIQINDKDTSEIKQRKDMTCEILFFEIVAIGFLGIASLLFKEKQ
MGVMRITGILPVKRSLFILSKIFAFLICDLCFTVLLVVFNIGFFEGVKILPQVLVQASIL
SIIMSLIGIGCSMLLRDFKQFSLIYLVVAVFITTPIFLSANTSFEIDWIKYHPFYHVYSQ
LKNAFFMNFSKELVYFVVCSLTIIVLFLLVKYIFNKELVREG
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgtattctaaattttttaccttagtaaaaaaagatttttggatgatgatttatggtaaa
ttttttgtgctgacacttggctctctcatactttattcgtgttatattaattttggttat
gtaaagtttatggatgaagatagttatcacaataatgtatatctatataatccagagaat
ataagcatgagtgcatctccattaattaatcaagtttcttctataggtgaattaaaagca
aaacttgatgaagatacaagtgcagtttgtattgatatgagttccagtaagccgaaagta
attttacatgaaagtattaaaggagttgacaattatagagctgactatgcattgtcatta
ttatcatcagaaaaagaccataatagcaaaatatcagacaacaatgcaataattcaaatt
aatgataaggatacatctgagataaaacaaagaaaagacatgacttgtgagattttattc
tttgaaattgtagctattggatttttagggattgcctctttattatttaaagaaaagcag
atgggagtaatgcgtattactggtattttacctgtaaaaagaagtctttttatattatca
aagatatttgcttttttgatatgtgacctatgttttacagttcttttagtagtatttaat
attggattttttgaaggagtaaaaatacttccacaagtattagttcaagctagtatttta
tcaattattatgtctttgattggaataggatgctcaatgttattgagagattttaagcaa
ttttctcttatatatcttgtggttgctgtattcataactacacctatatttctatctgca
aatacatcttttgaaatagattggattaaatatcatcccttctatcatgtttatagtcag
cttaaaaatgcgtttttcatgaatttttcaaaagaattagtttattttgtagtgtgttct
ttgacaataatagttctatttttacttgtaaaatatatttttaataaagagttggttagg
gagggataa
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