Clostridioides difficile R20291: CDR20291_3130
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Entry
CDR20291_3130 CDS
T00998
Symbol
pepF
Name
(GenBank) putative endopeptidase
KO
K08602
oligoendopeptidase F [EC:3.4.24.-]
Organism
cdl
Clostridioides difficile R20291
Brite
KEGG Orthology (KO) [BR:
cdl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cdl01002
]
CDR20291_3130 (pepF)
Peptidases and inhibitors [BR:
cdl01002
]
Metallo peptidases
Family M3
CDR20291_3130 (pepF)
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M3
Peptidase_M3_N
TetR_C_5
DASH_Duo1
Motif
Other DBs
NCBI-ProteinID:
CBE06973
UniProt:
A0A9R0CFV6
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Position
complement(3737958..3739742)
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AA seq
594 aa
AA seq
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MGTDRSTIEEKYKWKIDKMYSSKEEIEKDISKVKNLIQEVKEYKGKLSESKENLYKVLNI
SENASRIVQNLYVYTHMKQHEDTRINDNQGRATKTEMLSTDLGVATSYIVPEILAIEENK
LSEYLKDEKLSFYTKYIKDILRDKPHTLSEREEEILAATSELSTIPENVYDMLAYADMEF
PEIEDEEGNKVKLSHSNYSLFIKSKNSRVRKDAFEGEFSTYEKYKNTFASTLYGGIKSEI
FYAKTRKYNSAIEASLFSDDVSLDVYNNLISAIDKSIPNLNKYVELKKKFLGLNEIHMYD
LYVPLTDKFDMDIPYDKAQDIILEALKPLGEKYLKVIKSAFDEGWIDVYDNEGKKGGAYS
WGSYDSHPYILMSYKNDLNSLFTLIHELGHSVHSHYSRTSQPFLYSDYKIFVAEVASTLN
ELLLINYLLENSKSKDETIYLLNYYLEQFRTTVHRQTMFAEFEKIVHQRVESGEPLTADE
FTNIYYKLNEKYYGKSAIVDKQIGIEWARIPHFYSNFYVYKYATGFSAASALSQQILSEG
STAVDRYINFLKSGGSEYPLEQLKSAGVDMTKKESIEEALNVFAELVNKLEKEL
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgggaactgatagaagtacaatagaagaaaagtacaaatggaagatagataagatgtac
tccagtaaagaggaaattgaaaaagacataagtaaagtaaaaaatcttatccaagaagta
aaagaatataaagggaagctttctgagagtaaggagaacttatataaagtattaaatatc
tctgaaaatgcatctaggattgttcaaaatttatatgtatatactcatatgaaacaacat
gaagatactagaattaatgataatcaaggaagagccactaagacagaaatgttatctact
gatttaggtgtggctacttcttatatagttccagaaatactggcgatagaagagaataag
ttaagtgaatacttaaaagatgagaagctatccttttatacaaaatatataaaggatata
ttgagagataaaccacatactttgagtgaacgagaggaagaaatacttgcagctacatca
gaattatcgacaattccagaaaatgtatacgatatgttagcatatgcagatatggaattt
cctgagatagaagatgaggagggtaataaggttaagctttctcattcaaactactcttta
tttataaaaagtaagaatagtagagttagaaaagacgcttttgaaggtgaattttcaaca
tatgagaaatataaaaatacatttgcctcaacgctttatggtggaataaaatcagagata
ttttacgcaaaaactagaaagtataattcagcaatagaagcgtctttattttcagatgat
gtaagtttagatgtttacaataatcttatatcagctatagataaaagtattcctaatcta
aataaatatgttgagcttaaaaagaaatttttaggattgaatgaaatacacatgtatgat
ttgtatgttcctttgacagataaatttgacatggatataccatatgataaagcacaggat
atcatattagaggcacttaaacctttaggagaaaaatacttgaaggtcataaaaagtgct
tttgatgaagggtggattgatgtatatgataatgaaggtaaaaaaggaggagcttattct
tggggaagttatgattcacatccttatatattaatgagctataaaaatgaccttaattct
ctattcactttaattcatgaattagggcactctgttcacagtcattattcaagaacaagt
caaccatttttatattcggactataagatattcgttgcagaagttgcatctacattaaat
gaattacttcttataaattatttattagaaaattctaagtctaaggatgaaactatatac
ttattaaattattatttagaacaatttagaactacagttcatagacaaactatgtttgct
gaatttgaaaaaattgtacatcaaagggtagagagtggagaaccacttactgctgatgaa
tttactaatatatactacaaattaaatgaaaagtattacggaaaatctgcaatagtagat
aaacaaataggaatagaatgggcgagaatacctcatttttattcaaacttctatgtatat
aagtatgccacagggttttctgctgcaagtgctttaagtcaacagatactttcagaagga
agtactgcagtagatagatatataaacttcttaaaaagtggagggtcagaatacccacta
gaacaattaaaatctgctggtgtagatatgactaaaaaagaatctatagaggaagcctta
aatgtatttgctgaattagttaataaactagaaaaagaattatag
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