Clostridioides difficile R20291: CDR20291_3188
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Entry
CDR20291_3188 CDS
T00998
Name
(GenBank) sensor histidine kinase virs
KO
K20339
two-component system, LytTR family, sensor histidine kinase AgrC2 [EC:
2.7.13.3
]
Organism
cdl
Clostridioides difficile R20291
Pathway
cdl02020
Two-component system
cdl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cdl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CDR20291_3188
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CDR20291_3188
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cdl01001
]
CDR20291_3188
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
cdl02022
]
CDR20291_3188
Enzymes [BR:
cdl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
CDR20291_3188
Protein kinases [BR:
cdl01001
]
Histidine kinases
LytTR family [OT]
CDR20291_3188
Two-component system [BR:
cdl02022
]
LytTR family
AgrC2-AgrA2 (virulence regulation)
CDR20291_3188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c_5
Acyl_transf_3
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
CBE07079
UniProt:
A0A9R0BNG2
LinkDB
All DBs
Position
complement(3802587..3803903)
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AA seq
438 aa
AA seq
DB search
MLTNLSIGFWNIINLVSGTIDWIIFFLVIHLVGKRKISNIRYIFTTIIIFIFMAYINVVK
VFPNIKILLCMVIGISFYITSYEDKIYKSIIVSLLFWLGLMIAEGSAVGLVVFINKLNNI
NITQHENLFRIQAIIMSKVFLFIGFILFKYFKLSLDFKPKDMILIGIPILSNIVSLLLIF
EYNLRVNTITTENLFIFIFAILLILSSSIILLIVIGKIVQDDKLNLEYELINERIKTNYR
NYENINEVHDRLKYVYHDLKNHMICIKNYDTKEEIISYIDNLEFQISEFEHFKNTGNKTL
DLILAEKISICKKYDIQIEDNINISKLNFIENNDICSIFANSLDNAIEACMDINNELEKR
IEVKATYINKFAIIKFINTKVNDIKLIDKRIQTSKDDDKIHGIGLASIKYIVNKYGGETI
VNYSDNEFILKIMIPIKS
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgctaacaaatctaagtataggattttggaatattattaatttagtttcaggtactata
gattggattatattttttttagtaatccacttagttggaaagaggaaaatatctaatata
agatatatatttacaacaataattatatttatatttatggcatacataaatgtagttaaa
gtgtttccaaatattaagattcttctatgtatggtaataggaatatcattttatataaca
tcatatgaagataaaatatataaaagtataatagttagtttattgttttggctaggatta
atgattgctgaaggttctgcagtaggtctagtagtatttataaataaattaaataatatt
aacataacacaacatgaaaacttatttagaatacaagctattattatgtcaaaggtattt
ttatttataggttttatattgtttaagtattttaaattatctttagattttaaacctaaa
gatatgatactaataggaatacctatattatctaatatagttagcttattacttatattt
gaatataatttaagagtcaatacaattactacagaaaacttatttatatttatatttgca
attttattgattttatcatcaagtataatacttttaatagtaatagggaaaattgtacaa
gacgataaattaaatctagagtatgaacttataaatgaaagaataaaaacaaactacagg
aattatgaaaatataaacgaagttcatgatagattaaaatatgtttatcatgatttgaaa
aaccatatgatttgtataaaaaattatgacactaaagaagaaattatatcatatatagat
aacttagagtttcagataagtgaatttgaacattttaaaaatactggaaataaaacatta
gatttaattttagcagaaaaaataagtatttgtaaaaagtatgatattcaaattgaagat
aacataaatatatctaaattaaactttattgaaaataatgatatatgttcaatatttgca
aattcactagataatgcaattgaagcatgtatggatataaataatgagctagaaaaaaga
atagaagttaaagctacatatataaataaatttgcaataataaaatttataaatactaag
gtaaatgatattaaacttattgataaacgtattcaaactagtaaggatgatgataagata
catggaataggacttgctagtattaaatatatagtaaataaatatggtggtgaaacaata
gttaattactcagataatgagtttatattaaaaataatgataccaataaaaagttag
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