Clostridioides difficile R20291: CDR20291_3197
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Entry
CDR20291_3197 CDS
T00998
Name
(GenBank) GntR-family transcriptional regulator
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
cdl
Clostridioides difficile R20291
Brite
KEGG Orthology (KO) [BR:
cdl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cdl03000
]
CDR20291_3197
Transcription factors [BR:
cdl03000
]
Prokaryotic type
Helix-turn-helix
GntR family
CDR20291_3197
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GntR
Aminotran_1_2
HTH_36
HTH_24
HTH_11
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
CBE07096
UniProt:
A0A9R0CFY8
LinkDB
All DBs
Position
complement(3812205..3813620)
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AA seq
471 aa
AA seq
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MWITINRNSNISLSRQIYCEIKDMILDGSLKFEQKLPSSRTLSKELSVSRNTVLDAYNQL
IAEGYLETRNGYGTIVAKGISGHKVDFKLNDTFRDEKDLHTNKQKNYIDFRSGVPELKLF
PRKELSKLYKQILYDLSDSDFRYGSTAGVWVLRVEISKYLFRTRGIRCNSKNIMIVSGST
QGLSLISQLLYKSNKKVAVEDPIHKGLLKVISSIGYSVVGIKVDDKGMNTNLIKSIKGIS
FVYTTPSHQYPLGGILPIQRRLELIKCATENDYYIIEDDYDSEFRYEGQPISSLYELSPN
KVIYIGSFSKILSPAIRVGFMLLPDNILESYKTLKMYSDVHTETILQYVLAEFIGNGGLE
KYIFRMKKLYNRKRKYLIKVLNTEFKNEFKIKGEAAGLHIVAHFYNVKFTESLIHKIFEA
GIKVYPIQQYAIENILEYDHEIILGYAHLSFDEIEKGVKILSKIIHMNQGT
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgtggattacgattaatagaaatagtaatatatcattatcaagacaaatttattgtgag
ataaaagatatgattctggatggaagcttaaagtttgagcaaaaactgccatcatctagg
actttatcaaaagaactatctgtatctcgtaatacagttttagatgcatataatcaatta
attgcagaaggatatttggaaacaaggaatggatatggaacaattgtagctaaaggaata
tcagggcataaagttgattttaagttaaatgatacttttagagatgaaaaagatttacat
actaataaacaaaaaaattatatagattttcgttcaggagttccagaattaaaactattt
ccacgcaaagaactttcaaagctatataaacaaatactgtatgatttatcagattcggat
ttcagatatggaagtacagctggtgtatgggttttaagagtggaaatatctaagtattta
tttcgtactagaggaattagatgtaattccaaaaacattatgattgtttctggttcaaca
caaggtttatctttaatttcacagcttttatacaaaagtaataaaaaggttgctgtagaa
gaccctattcataaaggcttattaaaggttatttcatctattggatattcagttgttgga
attaaagtagatgataagggaatgaataccaacttaataaaatcaataaaggggatttct
tttgtttatactacaccttctcatcaatatccattaggagggattttacctattcaaaga
agactagagcttattaaatgtgcaacagagaatgattactatataattgaagatgattat
gatagtgaatttagatatgagggtcaaccaattagttctctttatgaacttagcccaaat
aaagtaatttacataggttcttttagtaaaatattatctccagctattcgtgttggattt
atgttattaccagacaatattttagaaagctataaaaccttaaaaatgtactctgatgtt
catacagaaacaatattgcaatatgtattagctgaatttattggaaatggaggtttagag
aagtacatatttagaatgaagaagttgtacaatagaaaacgtaaatatctcataaaagtt
ttaaacacggaatttaaaaatgaatttaaaataaaaggtgaagcagcagggcttcatata
gttgctcatttctataatgttaaatttacggaaagtttaattcataaaatttttgaagca
ggtataaaagtttatcctatacaacaatatgcaattgagaatatattagaatatgaccat
gaaattatactaggttatgctcatcttagttttgatgaaattgaaaaaggtgtaaaaata
ctcagcaaaataatacatatgaatcaaggtacatag
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